MSMEG0009
ms0009
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 10184 – 10276
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 gyrA MSMEG0007 MSMEG0008 MSMEG0009 MSMEG0010 MSMEG0011 MSMEG0012
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms0009_MSMEG0009_dna
CGCGGCCCTCATCGGCCTGGTCAACATCGTGGTTCTCAGCGCGATGGCGACGGTCGGCGCGTTCATCTACAACCTCACGACAGATCTCGTCGGGGGTATCGAAGTGACGTTGGCGGATCGGGATTGAACCGTTTTGGAGAACCGCCCCTCAGTGGGGTAATCTCGCTGCTCGGTTGATCCACTATTCGGGCCTATAGCTCAGGCGGTTAGAGCGCTTCGCTGATAACGAAGAGGTCGGAGGTTCGAGTCCTCCTAGGCCCACGACGCCGGTCTGCCGGTGATCACCGAAAGGGTGTGCCATGCGGTTTGTGGTGTTGGCTGTTGTGGCGGCTGTGGCGGTGATCGTCTGGCGATCACGACACGGCCAAGAGGTTTGGCATCAGGCCGGTTGA

Protein Sequence 

>Ms0009_MSMEG0009_protein
MRFVVLAVVAAVAVIVWRSRHGQEVWHQAG

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Unknown in vitro TnSeq [Dragset et al. (2019)]

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