MSMEG0063
ms0063
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 85248 – 85541
Vulnerability Index (VI):
M. tuberculosis homologs PE35, PE5, PE34
M. abscessus homologs
 +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon TSS Legend ? Ju, 2024 (4) Li, 2017 (5) Martini, 2019 (6) (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 (4) PMID: 38418874 (5) PMID: 29326668 (6) PMID: 30984135 MSMEG0061 MSMEG0062 MSMEG0063 MSMEG0064 MSMEG0065 MSMEG0066 MSMEG0067
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms0063_MSMEG0063_dna
GAACGACTTCCCGTCGCGGGACATCATCGTCAAGAAAAGGCCCCCTGGCCAGGCATTCCTTGTCGGTCCGGACGGAAAAGAGGTCATCCAGGCGGCCTACGTGGACCCACCCGAAGAAGAAGTGTTCTCACCACCTTCAGAGGGCAGTTAGTATTTGTTCAACGCACTCAGCAACGCTGGCGGCAGCTCGCCAGCAAAGGGATCGGGGGACAGATTCCTTGACGTTCTGGCAAATTTGCGCCAGGGGGATTCGAGTGCTTTGTCCTTGAATATGTCGAGTGGGGAAGGGGAGTACGCAAATGCAACCGATGACACACAATCCGGGTGCGGAAGCCGTTGCGGCGCAAGTTATCGCAAATGCAGCACGTGGTCTGGCCGGTGGCACCACCGCCTCGGCCGCGGTCACCGCATTGGTGCCTGCAGGCGCTGACGAGGTCTCGGCGCTGGCCGCCGTGGCGTTCGCCAGCGAGGGCGTCGAGGCTCTTGCGGCGAATGCGTTCGCGCAGGAGGAGCTGACGCGCGCAGGTGCCGCGTTCGCCGAGATCGCGGGCATCTACAACGCCGTGGACGCCGCCAACGCGGCCACGATGTAG

Protein Sequence 

>Ms0063_MSMEG0063_protein
MQPMTHNPGAEAVAAQVIANAARGLAGGTTASAAVTALVPAGADEVSALAAVAFASEGVEALAANAFAQEELTRAGAAFAEIAGIYNAVDAANAATM

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Growth Advantage in vitro TnSeq [Dragset et al. (2019)]

You do not have permission to view notes.