MSMEG0416
ms0416
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 492595 – 492756
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs MAB4425
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG0412 MSMEG0413 MSMEG0414 MSMEG0415 MSMEG0416 MSMEG0417 sdhA MSMEG0419
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms0416_MSMEG0416_dna
CATCGCCGAGCTGGACATGCATCCGCTCGACACCGTCGACCGCAAGGAGATGGCACAGGACGAGTTCGGGCTCGGCTACTGCAACATCACGAAGTGCTGCACCGAGGTGTGTCCCGAGCACATCAAGATCACCGACAATGCGTTGATCCCCATGAAAGAGCGCGTCGCGGACCGCAAGTACGACCCGATTGTCTGGTTGGGCAACAAGCTGTTCCGGCGGTGACGTTCGATCGGGTGCCCGTCCCCGATCTGCTGGGTACGCTCGATGGAAAGCAGCCAATCAACGACGAAAGGCAGCCTATGAGTACCCGTCAGATCCACAGCATCAACGACATCCGCACGGCCATCCGCGAACTGTCGGCGCGCGCGACACTCGCCCGCAAGGAAGGCCGCTCGGAGGATGCAGCCGAGATCGAACAGCGCATCGCCAAGTACCGCGAGGAACTCGCCGCACGGCCCTGA

Protein Sequence 

>Ms0416_MSMEG0416_protein
MSTRQIHSINDIRTAIRELSARATLARKEGRSEDAAEIEQRIAKYREELAARP

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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