MSMEG0547
ms0547
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 625597 – 626658
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG0543 MSMEG0545 MSMEG0546 MSMEG0547 MSMEG0548 MSMEG0549 MSMEG0550 MSMEG0551 MSMEG0552
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms0547_MSMEG0547_dna
CCACGGTGATGCTGCCCGCGGCGGCACCCGCTCTGGTGAACGGCCTGCGACTCGGACTCGCCAACGCGTGGCTGTTCCTGGTCGCCGCCGAGCTGATCGCGTCGTCGAAGGGCTTGGGCTTCATGCTCATCGACAGCCAGAACACCGGGCGCACCGACATCATGCTGTTGGCCATCGGACTTTTGGCCGGGCTGGGCAAGCTCACCGATTCGCTGTTCGGGATCTTCGAGGCGCGACTGGTGCGCAAGCGCAGCTAGTGTCGCGCGTCATTAATTAGTTTACAGTGTGGGATGATGGTGTATGCCGTCATCCACATTGGTGATCAGTTCTGAAGATCGTGTGACGTTGGAGTCGTGGACGCGGTCCTCGACGGTGCCTGCCGGCCGTGTTGAGCGGGCGCGGATCGTGCTGGCGGTGGCCGACGGTGCGGGGACCTCGGGTGCGGCGCGGCAGGTGGGGGTGTCGCGGCCGACGGTGATCAAGTGGCGGGATCGGTTCGCCGCGTTCGGCATTGAGGGGCTTGATGACGAACCACGCAGCGGCCGACCCAAGACGGTCGATGACGCCGAGATCCTGGCGACCACGCTCGAGCCGCCACCGGAATCGTTGGCCGTGACCCACTGGTCGAGTCGACTGCTCGGAAAGCACCTCGGGATCGGGGATGCCACGGTGGCCCGGGCGTGGCGACGCTACGGGGTCAAACCGTGGCGGCGCGAGACGTTCAAGTTCTCCACCGACCCTGAACTGGAGGCCAAGGTCCGTGACGTGATCGGCCTGTATCTGAACCCACCAGAAAAGGCGGTCGTGTTGTGCGTGGACGAAAAGAGCCAGATTCAGGCACTCAACCGCACCCAGCCGATTTTGCCGTTGCGTCCGGGACTGCCGGAGAGGGCGACCCACGACTATCAGCGCAACGGCACCGCCACGTTGTTCGCCGCCTTGGAAATCGCAACCGGCAAAGTGACCGACCGCTGCTACGAGCGGCACGGCAAAGCCGAGTTCCTCGATTTCCTCAAGACGGTCGCCCGGGCCTACCCGCGCCGCAAACTGCATGTGGTGTGCGACAACTACCACACCCACAAACACGCTGACATCAATGCGTGGTTGGTCAAGAATCCCCGCGTGACACTGCATTTCACCCCGACCTCAGGCTCCTGGTTGAACCTGGTCGAGGTGTTCTTCTCGATCATCACCCGCCAAGCAATCCGCCGGGGCTCGTTCAACAGCGTTAAAGAACTCATCGCTGCCATCAGCGCCTTCATCGAGGGCTGGAACCAACGCGCCCACCCATTCGTGTGGACCAAGACCGCCGACGAAATCCTGCCCCACACTCGTAAACAAACTTCAGACGCGCGACACTAG

Protein Sequence 

>Ms0547_MSMEG0547_protein
MPSSTLVISSEDRVTLESWTRSSTVPAGRVERARIVLAVADGAGTSGAARQVGVSRPTVIKWRDRFAAFGIEGLDDEPRSGRPKTVDDAEILATTLEPPPESLAVTHWSSRLLGKHLGIGDATVARAWRRYGVKPWRRETFKFSTDPELEAKVRDVIGLYLNPPEKAVVLCVDEKSQIQALNRTQPILPLRPGLPERATHDYQRNGTATLFAALEIATGKVTDRCYERHGKAEFLDFLKTVARAYPRRKLHVVCDNYHTHKHADINAWLVKNPRVTLHFTPTSGSWLNLVEVFFSIITRQAIRRGSFNSVKELIAAISAFIEGWNQRAHPFVWTKTADEILPHTRKQTSDARH

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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