MSMEG0648
ms0648
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 730087 – 730212
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG0644 MSMEG0645 MSMEG0646 phnC MSMEG0648 MSMEG0649 MSMEG0650 MSMEG0651
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms0648_MSMEG0648_dna
CGGCAGAACGTGATGACCGCGCGGGCCACGGCCTGCACCGCCGGGTGCGGTGTGGTGTTGCGCGCAGCGAGAAACGCCAGCGGGACCGACGCGATCGCCGCGAGGGTGGTGCCGAGCACCGCCATCAACAGGGTCTCGACGGCGAGCATGCCGATGCGTGCCGGATCGTCGAGTCGCGGCGGGATCATGCGTTGCAGCAGCGCGACGATGTTGTCGCTGCCGTCGATCAGCGCGGTCGGTACGAAATCGATCGCCCACGCCGAGACGATGGTGGCCAGCACCGCCGCGATCGCGACGAGGTGCAGAAGGCCGGGGAGGGAAGGCTTTCGAGACTCCGAAGGCCGGGACGGCGGGGCGGGCGGCCGGGTGATCTCGGTGGTCATACGCGACGCGCAGGGGTGACGGCGGGTTCGACGCGCTGGTAG

Protein Sequence 

>Ms0648_MSMEG0648_protein
VQKAGEGRLSRLRRPGRRGGRPGDLGGHTRRAGVTAGSTRW

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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