MSMEG1259
ms1259
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1347910 – 1348326
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG1255 MSMEG1256 MSMEG1257 MSMEG1258 MSMEG1259 MSMEG1260 MSMEG1261
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1259_MSMEG1259_dna
ACGGGCGTGAGATCGATGATGACGGTGACGTACTTGTCGCCGCGGCGAGTGTGCCGCCACACGTGCTCATCGACGCCGATCACCGCGACGCCATCGAACCGGGCCGGATCGGCGATGAGCACCCGCTGACCTTCGGCGAGCACGGCGTTGTTGGCAGTGTTCCACGACACCGCAAGCGCCTCGGCGACCCGGGCCACCGACAGGTGTTGGCAGACAAGGGCTTCCAGCGCCCACCGCAGAGCACGCCGGGACAGCCTGGCCCGCGGTTCGGCTGCGGCGCTGGCATCCTGGCGCCACACATGAGCGCAGCCGGCGCAACGGTAACGGCGGATCGTGACCAGCAAAGCCGTGGGTCGCCACCCGAACGGTTCATGAGCCAACGTGCGAGTCACGCTGTCACGTACAACGCCTTCTTCGCCGCAGCGGCGGCACCACCGATCCTCATCGGCGACCCGGCACGCCAGCACGGCCCGATCAGGGTCGAGGCGTTGGCCGGTCACCTCCAACCCGAGCTCGTCGAGGCGGCAGAAAGTCGTCAGGTCAGCGCAGGCGAAGCCCGCCCGACCGGTAGCGTCAGGCACGTCGAGGTCTTTCAGATGGATGGCGTAGGAACCTCCATCATCGGAAGACCTCGACCCCTATCCCGGCACCGACGCGCCGACGACCTCTACACCCTCAACTGCGAAGAGCCGGTAAAGCCGTTTGTAGCACCGTAA

Protein Sequence 

>Ms1259_MSMEG1259_protein
MSAAGATVTADRDQQSRGSPPERFMSQRASHAVTYNAFFAAAAAPPILIGDPARQHGPIRVEALAGHLQPELVEAAESRQVSAGEARPTGSVRHVEVFQMDGVGTSIIGRPRPLSRHRRADDLYTLNCEEPVKPFVAP

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Growth Advantage in vitro TnSeq [Dragset et al. (2019)]

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