MSMEG1338
ms1338
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1436094 – 1436167
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG1334 MSMEG1335 MSMEG1336 MSMEG1337 MSMEG1338 rpmG MSMEG1340 MSMEG1341 MSMEG1342 MSMEG1343 secE nusG
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1338_MSMEG1338_dna
GCCCGCGGGGTGCCCGCCGAGCGCGTGCACTGCGAGCTCTTCGCGCCCAACGACTGGCTGCTCGATTAGATCTGTGCAGGTCAAAGCCCCTTTGGCGGCCGCGTCAACCCGCGGTTTGGTGCGGCCGCCAGGGAGGCTGTACCCTCTTTAAGGCCCCGCGGCGAGAGTCGCGGGACTGAAGTAGGTAGGCCCCCTTAGCTCAGTCGGCAGAGCGTTTCCATGGTAAGGAAAAGGTCAACGGTTCGATTCCGTTAGGGGGCTCGGTGGACGTGCGGCGGACCGCCGCCTGTGTCTATCGGGGCGGTGTAGCTCAGCTGGTTAGAGCGCACGACTCATAATCGTGAGGTCGGGGGATCGAGCCCCCCCACCGCTA

Protein Sequence 

>Ms1338_MSMEG1338_protein

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Unknown in vitro TnSeq [Dragset et al. (2019)]

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