MSMEG1916
ms1916
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1997988 – 1998062
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG1910 catA MSMEG1912 ybaK MSMEG1914 MSMEG1915 MSMEG1916 MSMEG1917 MSMEG1918 MSMEG1919 MSMEG1920
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1916_MSMEG1916_dna
GTCGCCCTCGGCGACGTTGACCTTGGTGACCGTGCCCGCGACCTCGGCGAGCACCGGGATCTCCATCTTCATCGACTCGAGCAGCACCAGGGTGTCCCCTTCGCCGATCTGATCGCCCTCATGAACCACGACCTCGAGCACGCTGGCCACGATCTCGGCGCGAACGTCTTCGGCCATCTTCACCCCACTCCACTCTCCGGTGCTTTTCCGCACTAATCGAACCACAACCCCGGGTGGACAGTGCTGTCGCCGGGGCATGAGACACTAGAGAGCAAGCTCTAAACGTCTGGAGGGATCATTATGGCCAAGCGTGGCCGCAAGAAGCGTGACCGCAAGCACTCGAAGGCCAACCACGGCAAGCGACCCAACGCCTGA

Protein Sequence 

>Ms1916_MSMEG1916_protein
MAKRGRKKRDRKHSKANHGKRPNA

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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