MSMEG1949
ms1949
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 2027614 – 2027757
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG1944 MSMEG1945 nudC MSMEG1947 MSMEG1948 MSMEG1949 MSMEG1950 MSMEG1951 MSMEG1952
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1949_MSMEG1949_dna
ACTCAGCCGGGCGGTATGCCTGTGATCAGGTCACGCCATAACGGCCGCGCGGTGTGATGGGAGAGACACGACCACGTCGGGTTGTACCCGTGGCCGGGGACTCCCACGAATCGGACGAATTACGCCTGCGGGTACGGCAATTCGTCGCCGAACAACAACCGGCGGGCACGATCGGGCGTTACGCCGACAGCGCCGGTTGAGACGAGGAGTTGGCCCGCGCGCGACCGCCGGCGCACCGGGCGAAGCCGTGCGGACCGACCGGTCTTCGGCGACTTCGCGGTCGCGGCGGTGCGCCCGTCGTGTCGCCGCACCGGGACGCTCGCCGCACCGATCTCGCGACCGGCGCGCCGGGCTGGGGGCGCTCATCGCCGGCATCTGATCTTGAGGTGCACACGCCGCTGATCTTGAGTGGCGCACGCCACAATGCACGCGGATCGGATTAG

Protein Sequence 

>Ms1949_MSMEG1949_protein
VSPHRDARRTDLATGAPGWGRSSPASDLEVHTPLILSGARHNARGSD

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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