MSMEG2222
ms2222
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 2301963 – 2302109
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG2217 MSMEG2218 MSMEG2219 MSMEG2220 MSMEG2221 MSMEG2222 MSMEG2223 MSMEG2224 MSMEG2225 MSMEG2226
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms2222_MSMEG2222_dna
ACGGCCCGCAGCGAGTCGTCGCTCGCCGCCGCGGTCAGGGTTGTCACGAGTTCGCTGACCATGGTGTGGTCCAACGAGTTCCGCCGTGAGGGTCGATCCAGCACGATGCGCAGCACGGCGCCATCGCGGGTTACGGTCACCGAACCGTCGCTCACCAGCAGACCAGGCCTTTCCAGAGCCATACAGTTGCTCATACAGTAGGCGATGCGGTTACTATCCTGTACAAGATAGCCAAAAAAGACCTCCGGCGGAACAGCGCCCGGAAGCGGGGTGCAGATGTCGCGTATCTGCGCCGGCATGTGCGCCGCACGTGGCGACCGGGCCGCCGAGGCCATGCCCTATCAGCAGGCCGAGATCGACCGGCAGAAGCACGGTTCGACGATGCCGCGCAGTACGTACCCAACGCGCCGGCGGTGGGAATCGACAAATCATTGAAGCGAGGTTGA

Protein Sequence 

>Ms2222_MSMEG2222_protein
VRRTWRPGRRGHALSAGRDRPAEARFDDAAQYVPNAPAVGIDKSLKRG

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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