MSMEG2426
ms2426
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 2509665 – 2510003
Vulnerability Index (VI):
M. tuberculosis homologs glnB
M. abscessus homologs MAB3239c
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 ftsY amt MSMEG2426 glnD MSMEG2428
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms2426_MSMEG2426_dna
TCGTTGGCGTGCACCTGGTTGCGGGCCTGTGGGGCACCGTCGCCATCGGCCTGTTCGCCACGGAGACCGGCCTGTTCTACGGCGGCGGCATCCAGCAGCTGGTCGTCCAGATCGTGATCGCCGTCGTGGCAACCGTATTCACCGCCGTCATGACTGCCATCATTGCGTTGGCCCTCAAGCCGATGGGCTGGCGTGTGACAGATGAAGATGAGGCCACCGGTATCGATGAGACCGAGCATGCGGAAACGGCTTACGAGCTCGCCTGATCGGGAACAATTGCCCTGGAAGGGATGGAATCTATGAAGCTGATTACTGCGATCGTCAAGCCGTTCACGCTGGAAGATGTCAAGACGGGCCTGGAGCAGACGGGCATCTTGGGCATGACCGTCAGCGAGGTTCAGGGCTACGGGCGCCAGAAGGGCCATACTGAGGTGTACCGCGGTGCCGAGTACTCGGTGGACTTCGTGCCCAAGGTCCGGGTGGAGGTCGTCGTCGACGACTCCGCCGTCGACAAGGTCGTCGACGTCATCGTCCAGGCTGCGCGCACCGGGAAGATCGGTGACGGCAAGGTGTGGGTGAGCCCGGTGGAAACCGTGGTCCGTGTTCGCACCGGGGAGCGGGGAGCCGACGCCCTGTAG

Protein Sequence 

>Ms2426_MSMEG2426_protein
MKLITAIVKPFTLEDVKTGLEQTGILGMTVSEVQGYGRQKGHTEVYRGAEYSVDFVPKVRVEVVVDDSAVDKVVDVIVQAARTGKIGDGKVWVSPVETVVRVRTGERGADAL

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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