MSMEG2436
ms2436
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 2520258 – 2520488
Vulnerability Index (VI):
M. tuberculosis homologs Rv2908c
M. abscessus homologs MAB3228c
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG2432 MSMEG2433 MSMEG2434 rpsP MSMEG2436 rimM trmD MSMEG2439 rplS lepB
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms2436_MSMEG2436_dna
CAGCCCACCGAGCCGGTTCTGGCCCTGCTGAAGATCACCGGTGACTGGCAGAAGTTCAAGGGCCTCCCGGGCGCCGAGGGCACCCTGAAGGTCAAGGAGCCCAAGCCGTCCAAGCTGGATCTGTTCAACGCAGCCCTGGCCGAGGCCGAGAGCGGCACCACCGCGGCCGCCACCACGCCCAAGAAGAAGAAGGCGCCGAAGAAGGACGAGGCTGCCGAGGCGCCGGCTGAGGCCGCCGAGGCTCCGGCTGAAGCCGCCGACGCCGCAAGCGAGAGCTGAGCACCGCAGTGAGTTCAGTCGTGGTCGACGCCGTCGAGCACCTGGTCCGCGGGATCGTCGACAACCCTGACGATGTGCGTGTCGACATGGTCACCAACCGCCGGGGACGGACCGTCGAGGTGCATGTGCACCCCGACGACCTCGGCAAGGTGATCGGCCGTGGCGGCCGTACCGCCACGGCGCTGCGCACCCTGGTCGCCGGGATCGGCGGCCGGGGCATCCGCGTCGACGTTGTCGACACCGACCAGTAA

Protein Sequence 

>Ms2436_MSMEG2436_protein
VVDAVEHLVRGIVDNPDDVRVDMVTNRRGRTVEVHVHPDDLGKVIGRGGRTATALRTLVAGIGGRGIRVDVVDTDQ

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Growth Defect in vitro TnSeq [Dragset et al. (2019)]

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