MSMEG3104
ms3104
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 3179681 – 3179839
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
 +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon TSS Legend ? Ju, 2024 (5) Li, 2017 (4) (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 (4) PMID: 29326668 (5) PMID: 38418874 tal tkt MSMEG3104 cyoE MSMEG3106 MSMEG3107 MSMEG3108
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms3104_MSMEG3104_dna
AAGCGGTCGCGACCCAGCCAGTGCGTGTCGCTGGGGTCATGGCGCATCTGCCGCTGGAACAGCGTGTACGCGAGCGGCGCGAGGCTCATCGCCGTACCCGGGTGGCCGTTGCCGACCTTCTGTACCGCGTCAGCCGCGAGCACCCGTGCCGTGTCGACGCTGAGCGTGTCGAGATCGGTCCAATCGTCGGGGTGGTTGGGCTGGGTGAGAGCGGTGATCTCTTCGGCCGTGGTCACGACTCACTCCTAATTCGTCTTCGTGATCGAACTTGCACTTGCTTCTTCACCAAACACCCTAGTGTGGTCCGGCCCATCCGATGCATGTCGGCCATCGGCGAATACTGGGGATTCGTCTACCCGGATTTCGCCGCGCCGACGCCGGGCCGAGCGCCAACCGACCCTGCGATTCGGAGCTTGCGCGGCGGCCGTCTACCATCGTCCGTAGTAGAAGCCACGTGA

Protein Sequence 

>Ms3104_MSMEG3104_protein
VVRPIRCMSAIGEYWGFVYPDFAAPTPGRAPTDPAIRSLRGGRLPSSVVEAT

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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