MSMEG3258
ms3258
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 3339343 – 3339477
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG3254 MSMEG3255 MSMEG3256 xylB MSMEG3258 MSMEG3259 MSMEG3260 MSMEG3261
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms3258_MSMEG3258_dna
TTCTGCATCGACAAGATCGTCAGCTACGGCGTCGACATCGAACGCATCATCCTGGTCGGCGGCGGCGCCCGTTCCGAGGCCGTGCGGCGCATCGCCCCCGCGATCTGGGGCAGGCCCGTCGACGTCCCCCCACCGGGCGAGTACGTCGCGCTGGGCGCGGCCCGGCAAGCGGCATGGGCTCTGGGGCAACAGGATTCGCCACCGGCCTGGCAGGTCGGATCGACCACCACCTACACCGCCGAGCACGCACCACAGGTCCTCGAACAGTATCTCGCCGCGCAGCCGCTGACGCTGGGGCAGTGAGATACGCCGGGCGAACCCGGCCGCGAATCTCGTTCGACGGCAACAGCAGTGGCTGGTCGACCACGTCGCCGATGACCAGGCATAAAATCGCGGCGGGCCTAACGGTTGGCGTTTGCGTCACCACGGCCTAG

Protein Sequence 

>Ms3258_MSMEG3258_protein
VRYAGRTRPRISFDGNSSGWSTTSPMTRHKIAAGLTVGVCVTTA

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

You do not have permission to view notes.