MSMEG3330
ms3330
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 3407751 – 3407924
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs MAB1241c
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG3326 MSMEG3327 MSMEG3328 MSMEG3329 MSMEG3330 MSMEG3331 MSMEG3332
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms3330_MSMEG3330_dna
CGGGACGCGGGCGAGCCGCCCGCCGTGAACTCGACAGGTCACGACGTGAGACCGCGTTTCTGAATCAGGAGCGCGATCGGCGGCTCGAACACGACCAGGACCACGCCGTCGCAGCCTCGGCGGTGCCCCCGCAGCGCGCCGTCCCCAGCCGCAGCAGAGATGCTCGGTTCGGCCGGTGGTGGCACGGTGGACAACCGGTGCGCGCCGCCGGAGTCGACACCGCCGGTAGGCCAACCCCGGCCGATACCTCCAGCCCGCGCTCGCGGGGGCGGTGAACACCGAAAACCAAGGAGCACGTAAATGAGCGTCGGTAAGAAGATCGCCCACAAGGCCGAATCCGCCAAGGGCACGGTGAAAAAGCTCTTCGGTCGCGCCATCGGCAACACCCGCCTGCGTACTGAAGGACGCGCCGATCAGTTCAAGGGCAACACCAAACAGGCCGGCGCCAAGGTCAAAGACGCCTTCAAACACTGA

Protein Sequence 

>Ms3330_MSMEG3330_protein
MSVGKKIAHKAESAKGTVKKLFGRAIGNTRLRTEGRADQFKGNTKQAGAKVKDAFKH

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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