MSMEG3510
ms3510
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 3574156 – 3575241
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
 +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon TSS Legend ? Ju, 2024 (4) Li, 2017 (5) (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 (4) PMID: 38418874 (5) PMID: 29326668 MSMEG3508 MSMEG3509 MSMEG3510 MSMEG3511 MSMEG3512 MSMEG3513 MSMEG3514 MSMEG3515
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms3510_MSMEG3510_dna
CCAGTCGCCGAGGCGATGGCCACCGGCGCCATGCACCACTTCGAGGCCGACACCGCGGTCGCGATCACCGGAATCGCGGGACCCGGCGGAGGTTCCACGGAAAAACCGGTCGGCACAGTGTGTTTCGCTGTGCGCGCGGAGGGTGCGTCGATCACCCGCACGCTGCTGCTGCCGGGAAACCGCTCCGACATCAGGGAACGGTCCACCACCGTGGCCATGCACCTGCTGCGGCGCGCCCTGCGCGGCGAGAGCGACTAGTGTCCTGAGTCATTAATTGCGGCCTAGTTGTTAAACTAGGTCGTGCCGACTCCTCATGCCGCTGAGATTGTGTTGTCCGCTGATGAGCGGGCCGAGTTGGAGGGCTGGGCGCGGCGACGTACGAGTGCTGCCGGCCTGGCCATGCGGGCTCGAATTGTGTTGGCAGCTGCCGATGGTGGGTCCAATACTGAACTGGCCGATCGCCTGGAGTTGTCGATCGGCACGGTGCGGCGCTGGCGCAATCGGTTCGCTGAGCTGCGACTGGACGGCCTCGTTGATGAACCACGTCCGGGTCGGCCGCGGGTTGTCGGTGACGAGCAGATCGAAGCGTTGATCACCGCGACGTTGGAGACCACCCCGCCTGATGCCACCCATTGGTCAACCCGCTCGATGGCTGCCCATCTGGGGTTGAGTCAGTCGATGGTCTCGCGCGTCTGGCGAGCGTTCGGACTGGCTCCCCACAAGCAGGACTCGTGGAAACTGTCGAAAGACCCGCTGTTTGTGGCCAAGGTCCGCGATGTCGTCGGGCTGTACCTGAACCCACCGGAACGGGCCTTGGTGCTGTGCGTGGACGAGAAAACCCAGATCCAGGCACTGAACCGGACCCAACCGGTGTTCCCGATGTTGCCCGGCACCCCGGCGCGGGCCAGCCATGACTACGTTCGCCACGGCACCTCCAGCCTCTACGCCGCTCTCGACCTGACCACCGGCAAGGTGATCGGCGCCCTGCACTCTCGCCACCGAGCCACGGAGTTTCTGGCTTTTCTCAAGAAGATCGACGTCGAGGTCCCCGACGATCTTGATGTGCACTTGGTTCTCGACAACGCCTCCACGCACAAGACCCCTGCGGTAAAACGTTGGCTGACAGGCCATCCCAGATTTGTCCTGCACTTCACCCCGACCAGCTCGTCCTGGCTCAATCTCGTGGAACGCTGGTTCGCCGAGCTGACCACCAAGAAGCTGCGACGCTCCACCCACACCTCAGTTCGGCAACTCAACGCCGACATCCGAGCGTGGATCGACACCTGGAACGACAACCCCAAGCCCTACGTCTGGACCAAGACCGCCGATCAAATCCTGGCCAGCATCGCCAACTACTGCGCCCGAATTAATGACTCAGGACACTAG

Protein Sequence 

>Ms3510_MSMEG3510_protein
VPTPHAAEIVLSADERAELEGWARRRTSAAGLAMRARIVLAAADGGSNTELADRLELSIGTVRRWRNRFAELRLDGLVDEPRPGRPRVVGDEQIEALITATLETTPPDATHWSTRSMAAHLGLSQSMVSRVWRAFGLAPHKQDSWKLSKDPLFVAKVRDVVGLYLNPPERALVLCVDEKTQIQALNRTQPVFPMLPGTPARASHDYVRHGTSSLYAALDLTTGKVIGALHSRHRATEFLAFLKKIDVEVPDDLDVHLVLDNASTHKTPAVKRWLTGHPRFVLHFTPTSSSWLNLVERWFAELTTKKLRRSTHTSVRQLNADIRAWIDTWNDNPKPYVWTKTADQILASIANYCARINDSGH

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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