MSMEG3568
ms3568
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 3627559 – 3627768
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG3563 bfr MSMEG3565 MSMEG3566 MSMEG3567 MSMEG3568 MSMEG3569 MSMEG3570
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms3568_MSMEG3568_dna
ATCGTCGGCGCGGTCGCACCCGTCGACGACGTCTCCACACTCATGCGGAAAGTGCACGACGGCCTCGCGCGATTCGCCGGCAGCGGCATCCGCAAGATCTGGGTCTACCGGGCGCTCGACGACGGCAACGAGGTCATGATCCTGCAGGAGATCGAGAACGAGGTCAGCGCACGTCAGTGGATCTCGCATCCCGACGCGGCCGCGGAGTGGATGACCAACGCCGGATTCGGCCCGTACCCCAGCCTGTTCGTCGGGAAGCTGGCGCACATCATGACCATCGAAGGGCAGGTGTAGCGGTCATGTTCGTCTGCCTGTGCACCGGCACCACCAGCCACGTGGTCAACGAGATCGTGGCGGGCGGCGCGACCACCTCGAAGGAGGTGGCCGAGGCGTGTGGGGCCGGCGGTGACTGCGGCCGCTGCAGGCGCACCATCCGCGCGATCATCTCCGCGCATCTGGGCGGCCACACGGCACACCACAACGGCTGCCCGACGCGCGCGAGCGGTTAG

Protein Sequence 

>Ms3568_MSMEG3568_protein
MFVCLCTGTTSHVVNEIVAGGATTSKEVAEACGAGGDCGRCRRTIRAIISAHLGGHTAHHNGCPTRASG

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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