MSMEG3597
ms3597
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 3661633 – 3662124
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG3595 MSMEG3596 MSMEG3597 MSMEG3598 MSMEG3599 MSMEG3600 MSMEG3601
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms3597_MSMEG3597_dna
TACGGCGCGTCGCGGTCGGTGACACTGAGCGGGTTCATCGACCTGCTGGGCGATCTGCCCGACGACGTCAGCGCACTGGGCAACGCCCGCGCGCTCGCGGCCGAACTCGGGCAGAACCTGCGCGCGGCGACCGTGAACGATCCGCTGTTCGGCGGCGCGGGCACCGCGGCCGATCCCGGCGTGCTGCTGACACCGTCTGCCGGCTACCGCGCGCGGGTTTCGGTGATCAGCATGGTGGGGCTGACCAACGAACAGCAGCGCGAGGGGTTCGTCAACCAACTCCAGATGGCGTTGTTCGCATGGATCAAACGCAATCCGGCAGGCAACCGGCCGCTGGGCGGGCTTCTGGTGATGGACGAGGCGCAGAACTTCGCGCCGTCGAGCCACACCACCGCCTCCACGCACAGCACGCTCGCGCTGTCGTCGCAGGCCCGCAAGTACGGCCTGGGCCTGGTGTTCGCGACACAGTCGCCGCGCGGGCTGCACAACCACATCCCCGGCAACTCCGCGACGCAGTTCTACGGGCTGCTGAACTCACCGGCACAGATCGCGGTCGCCAGGGAGATGGCGCGCGTCAAGGGCGGCCTGGTGCCGGACATCAGCAGGCTGCGCTCGGGACAGTTTTATCTGGCGTTGGAGGGCAACGCCTTCCACAAGATCCAGACACCGTGGTGCCTGTCGCACCACCCGCCGAGCCCGCCGACCACCGACGAGGTGCTGAGGTTGGCGCAGCAGCGCGAACCCGCAGCACCCTGACCCGAAAAAAGAGGCCGGCCACCGAGGTTCGGTGA

Protein Sequence 

>Ms3597_MSMEG3597_protein
MDQTQSGRQPAAGRASGDGRGAELRAVEPHHRLHAQHARAVVAGPQVRPGPGVRDTVAARAAQPHPRQLRDAVLRAAELTGTDRGRQGDGARQGRPGAGHQQAALGTVLSGVGGQRLPQDPDTVVPVAPPAEPADHRRGAEVGAAARTRSTLTRKKRPATEVR

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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