MSMEG3716
ms3716
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 3786107 – 3786208
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG3715 MSMEG3716 MSMEG3718 MSMEG3719 MSMEG3720 pqqE
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms3716_MSMEG3716_dna
CGGTCCGTGAACACCGGATCGGCGGGGAGGGTGACATTCCCCACGTGACACCGCAAATCATCATCAAATACGTCGCCGATCTGCAGCGCCTGGGGCTGCTCGATGCCCACCCCACATCCGCACCGCGGTCCGCGTAGTCGCCCTACGCATGGGCGATCGGCTGGCACTGCTGGAGGAAGTATGGCTGATCGAGCCGCTGCCGGTCAGAGTGCCGCGGTCCGCGTAGTCGCACACCTCGCGCGTTCACCGTCGTTCATTGGACGGAACTCCCCCGCGGCGGCCACTTCGCCGCCTGGGAGGTGCCCGACTCGCTCGCCGAGGACGTACCGACCGCTCAGAGCGTTCGAGCCGGCACGGCCGCGATCTTGAATTCACCCACGTCGCATCCGTTCGTCATGTAA

Protein Sequence 

>Ms3716_MSMEG3716_protein
VPDSLAEDVPTAQSVRAGTAAILNSPTSHPFVM

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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