MSMEG4016
ms4016
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 4089336 – 4089491
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 hydA MSMEG4013 MSMEG4014 MSMEG4015 MSMEG4016 MSMEG4017 MSMEG4018 MSMEG4019
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms4016_MSMEG4016_dna
AGTTGCCGCTGACGTGCACATCGAACGTCGTTTCGCTCATACCTGGAAGGGACACACCTACACTCCCGAGGGCGTCACACTGGCCGAGGCCGCGATCGAGGCACTGGAACTGAACTCGATGCACGTGCGCACCCGCGCCGGCCATGACTCCACGAACATGAAGGACGTCGTTCCGACGGTGATGCTGTTCATCCCCAGCGTCGACGGGGTCTCACACGCGGAGAACGAGTTCACCCACGACAAGGACCTGACCACCGGTGTGGATGTGCTCACCGAGACCATGGCACGCATGGTGGAGGGTGATCTGTGAGCTGACACCCGGCCGTATCACGCATCAGCCGCCGCACGAGCAGGGTGAGCTCGCCTGTCGATCCGAGCGCGCGCGTCGCATCGAACCGACCACGGTGGCGCTCACCGCCTGGATGAGGCCGTCGACTTCGTCGTCGACGCGGTGA

Protein Sequence 

>Ms4016_MSMEG4016_protein
VICELTPGRITHQPPHEQGELACRSERARRIEPTTVALTAWMRPSTSSSTR

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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