MSMEG4072
ms4072
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 4144114 – 4145160
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG4066 MSMEG4067 MSMEG4068 MSMEG4069 MSMEG4070 MSMEG4072 MSMEG4074 MSMEG4075
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms4072_MSMEG4072_dna
TCGTTTTCGGACCAGCGCCCGAACCCTCCGCTCCGCACGCCCCGCTACCTCATTCGTGGCAAATCTCGCCGGTGAAGCGGACAACACCGACAGCATGCTGGCCCACAGCACCCTCGCCTTCGGGCTTACTGACCCACCCGCGGCTTCGAAAGGTCCCGCGGTAGCCTGCGAACCTGCCCGTGGCCTCAACCACGGTGTACTCCCCCTCCAGGATGGAAACTCGGTCTTCGGCGGGCGCTAGTGTCGCGCGTCATTAATTAGTTTACAGTGTGGGATGATGGTGTATTCCGTCATCCACATTGGTGATCAGTTCTGAAGATCGTGTGACGTTGGAGTCGTGGACGCGGTCCTCGACGGTGCCTGCCGGCCGTGTTGAGCGGGCGCGGATCGTGCTGGCGGTGGCCGACGGTGCGGGGACCTCGGGTGCGGCGCGGCAGGTGGGGGTGTCGCGGCCGACGGTGATCAAGTGGCGGGATCGGTTCGCCGCGTTCGGCATTGAGGGGCTTGATGACGAACCACGCAGCGGCCGACCCAAGACGGTCGATGACGCCGAGATCCTGGCGACCACGCTCGAGCCGCCACCGGAATCGTTGGCCGTGACCCACTGGTCGAGTCGACTGCTCGGAAAGCACCTCGGGATCGGGGATGCCACGGTGGCCCGGGCGTGGCGACGCTACGGGGTCAAACCGTGGCGGCGCGAGACGTTCAAGTTCTCCACCGACCCTGAACTGGAGGCCAAGGTCCGTGACGTGATCGGCCTGTATCTGAACCCAACAGAAAAGGCGGTCGTGTTGTGCGTGGACGAAAAGAGCCAGATTCAGGCACTCAACCGCACCCAGCCGATTTTGCCGTTGCGTCCGGGACTGCCGGAGAGGGCGACCCACGACTATCAGCGCAACGGCACCGCCACGTTGTTCGCCGCCTTGGAAATCGCAACCGGCAAAGTGACCGACCGCTGCTACGAGCGGCACGGCAAAGCCGAGTTCCTCGATTTCCTCAAGACGGTCGCCCGGGCCTACCCGCGCCGCAAACTGCATGTGGTGTGCGACAACTACCACACCCACAAACACGCTGACATCAATGCGTGGTTGGTCAAGAATCCCCGCGTGACACTGCATTTCACCCCGACCTCAGGCTCCTGGTTGAACCTGGTCGAGGTGTTCTTCTCGATCATCACCCGCCAAGAAATCCGCCGGGGCTCGTTCAACAGCGTTAAAGAACTCATCGCTGCCATCAGCGCCTTCATCGAGGGCTGGAACCAACGCGCCCACCCATTCGTGTGGACCAAGACCGCCGACGAAATCCTGCCCCACACTCGTAAACAAACTTCAGACGCGCGACACTAG

Protein Sequence 

>Ms4072_MSMEG4072_protein
LVISSEDRVTLESWTRSSTVPAGRVERARIVLAVADGAGTSGAARQVGVSRPTVIKWRDRFAAFGIEGLDDEPRSGRPKTVDDAEILATTLEPPPESLAVTHWSSRLLGKHLGIGDATVARAWRRYGVKPWRRETFKFSTDPELEAKVRDVIGLYLNPTEKAVVLCVDEKSQIQALNRTQPILPLRPGLPERATHDYQRNGTATLFAALEIATGKVTDRCYERHGKAEFLDFLKTVARAYPRRKLHVVCDNYHTHKHADINAWLVKNPRVTLHFTPTSGSWLNLVEVFFSIITRQEIRRGSFNSVKELIAAISAFIEGWNQRAHPFVWTKTADEILPHTRKQTSDARH

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

You do not have permission to view notes.