MSMEG4438
ms4438
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 4523377 – 4523499
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG4436 ctaD MSMEG4438 MSMEG4439 MSMEG4440 MSMEG4441 MSMEG4442 MSMEG4444
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms4438_MSMEG4438_dna
CCCCCGCGATGTGGGGTCACGGATACGGCTCGGAAGCCGGCCATGCCGTCGCGCACCAGGCCTTCGAGAACGCCGGCCTCAGCGAGGTGTTCGCGGTCATGCGGCCAGGAAATCGTCGTGCCGTGGCCACCGCGCGGCGGGTCGGTATGGAGTGGGTCGGCGAGACCACGAAGTACTACGGGTTGTCGCTGCAGGTGTATCGACTCCGGAAGGCGGACCTGGATCTGCCGGAACCGGGTTGTGCCTCGCGGACCTGAGCGAGGGAAGTTCATGCGCGGCGACTGTTCACCCGGGTGATCGGTGCGGCTGGGTGAAGACAGCTCATCCGGTACCGGGCCAGGATCGAGTCTCGACAAGGGCATGCGCGGCGACGGGTGGAAGACCGTCGCACGTGCGACGGACAGGAGAGAACCGGACCGTTGA

Protein Sequence 

>Ms4438_MSMEG4438_protein
VRLGEDSSSGTGPGSSLDKGMRGDGWKTVARATDRREPDR

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

You do not have permission to view notes.