MSMEG5081
ms5081
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 5180979 – 5181146
Vulnerability Index (VI):
M. tuberculosis homologs Rv1211
M. abscessus homologs MAB1350
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 glgC MSMEG5079 MSMEG5080 MSMEG5081 tag MSMEG5083 MSMEG5084 folP
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms5081_MSMEG5081_dna
CAAGGAACTCAAGCGTCGCGGGTTCCGGTTCGTCGGGCCGACGACGGCATATGCGTTGATGCAGGCCACCGGGATGGTCGACGATCACGTCGCGACATGCTGGGTTCCGCCGCTCCGACATGGTCAAGATCTGCGCCACGCGCAGGCCAAGGCAGGGTCTTCGCACACCCTGCGCCCCGGATAGGGAACAATAGGGGTTAGTTCAGTAGCAGTTCAGTGCCGGGTGCCGTCAACGAGTGGGCGGCGTCGGCCCCGACCTGGCCCGCCGAGGCGGACCGGCTCAGTTGGAGGGAGCACTCGATGGCGGCGATGAAGCCCCGGACTGGCGACGGTCCACTGGAAGCAACCAAAGAGGGGCGAGGGATCGTGATGCGGGTACCGCTTGAGGGCGGAGGGCGCCTCGTCGTCGAACTCACCCCGGACGAGGCAGCCGCCCTGGGCGACGAGCTCAAGGGCGTCACCAGCTAG

Protein Sequence 

>Ms5081_MSMEG5081_protein
MAAMKPRTGDGPLEATKEGRGIVMRVPLEGGGRLVVELTPDEAAALGDELKGVTS

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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