MSMEG5293
ms5293
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 5384778 – 5384888
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
 +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon TSS Legend ? Ju, 2024 (4) Li, 2017 (5) (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 (4) PMID: 38418874 (5) PMID: 29326668 MSMEG5288 MSMEG5289 MSMEG5290 MSMEG5291 MSMEG5292 MSMEG5293 MSMEG5294 MSMEG5295 MSMEG5296 MSMEG5297
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms5293_MSMEG5293_dna
AATTGAGTTTCCGAAACGATGTATCCAGGGGAAGATGGTTCTGTAGACCCCGTCTAAGTCGGTGAGATGCGAGAAGAGGTGCGGTTGATGCGCGTGAAATGGTCCTTGATGGCGGTCGCTGCGGCTGCGATCGGGGTGGTGAGCGCACCCGCGGGTCTCGCGTCGGCCGAGGAGACCGCCCAGGAGACCATCAACCGACTGCAGTCCCAGGGCTACACCGTGCAGATCGACCGCATCGGCACCGCACCGATGGACAAATGCGTGGTCACCAACGTCCGTAACCCGCAGCAGGTCCGTCAATGGCTGCCGTACGTGGGTCCCGGCCTCAACACCGACAGCGTCCTGATCAACACCGTCACCAGTCAGACGGTGTCGGTGTCGCTGAACTGCCAGCGCTGAGCACCGGGTAG

Protein Sequence 

>Ms5293_MSMEG5293_protein
MAAVRGSRPQHRQRPDQHRHQSDGVGVAELPALSTG

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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