MSMEG5552
ms5552
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 5643114 – 5643251
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG5551 MSMEG5552 cheR MSMEG5554 MSMEG5556
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms5552_MSMEG5552_dna
ACACACCCCTGGTGGACGTCGCGCGCGAGATCGTCACCACCGCTGAACGGCCGGCCGATGTCAGCACCCAGTGATCCTCACGACGCCACACACGAGGCGCGTGCCAAAGCTGCAGACGTGAGGGCGAAGGAGCTCGCAGAGCGCCGCACCGCACTTGTGCAGGGTCGAGCTTCGACAGCTGATGACGTCGCAACGGCCAGGAAACGCGCAGAACAGGCCAGGCAGCATGCGCTGGACGCGCATCACTCGGCCGCTCGGCGGCACATGGATGCCAGAGCAGCTCACCTGCGCGCGGCAGCGATGCACGAGCAGGCCGCCCTCACGGCCGACGACGACGAAGCAGATATGCACCAGAACGCCGCCGAGGTACACCGCGCCGAAGCCGAGCGGCACGCAGCGGCTGCCGTCGCCGACGAGGCCGCGGGTGACGCAGGCTAG

Protein Sequence 

>Ms5552_MSMEG5552_protein
MHEQAALTADDDEADMHQNAAEVHRAEAERHAAAAVADEAAGDAG

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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