MSMEG6417
ms6417
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 6487586 – 6487774
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 serS MSMEG6414 MSMEG6415 MSMEG6416 MSMEG6417 MSMEG6418 MSMEG6419 MSMEG6420 MSMEG6421
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms6417_MSMEG6417_dna
CCCGACGAACCTGAGATCCTCGGGCTGTACCAGGGCGTGGCGCTGACCGAGCGGGACTCCTGGTACGCGGGCTCACTGCCCGACACCATCACGATCTACCGCGATGCCCTGCTCGACATCTGCGACACCGAGGACGACGTGATCGACGAGGTCGCGATCACCGTGATCCACGAGATCGCTCACCATTTCGGGATCGATGACGAGAGGCTCCACGAGTTGGGGTGGGGATGAGCGCTTCGGACACGAAAACGCCCGCGCGGCAACCACGTTTTGTCGGCCCGCAGTGTTATGAACGGGACATGACGATCCAGTGCCGGGACTGTGTGGCCGGGCTGGAGCACTGCCACGGCACCCTGATCCACCATGTCCGGTACTGCGTCGAGTGCACAGACGACGGCTGCACCACCCCAGAGATAGCGCACACCTTCAGCATCGACTGCGAGACGGTCGGCTGCCTGTGCAGCGAGGACATCGCGATCGCGATCTAA

Protein Sequence 

>Ms6417_MSMEG6417_protein
MTIQCRDCVAGLEHCHGTLIHHVRYCVECTDDGCTTPEIAHTFSIDCETVGCLCSEDIAIAI

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Growth Advantage in vitro TnSeq [Dragset et al. (2019)]

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