MSMEG6472
ms6472
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 6536834 – 6537058
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG6468 MSMEG6469 MSMEG6470 MSMEG6471 MSMEG6472 MSMEG6473 MSMEG6474 MSMEG6475 MSMEG6476 msrA
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms6472_MSMEG6472_dna
CCACAGTCCCGTGTAACCCGCGCCGACGATGCAGACGTCGGCATCCTGGTCGCCGGGCAGGGGCGCCCGGGGTGTGGGCAGGGTGTCGAACCAATGCGAGATCTGACCGTTCACCGTGTTGAGCACCGTGAGATTCTGCCAGGAGTTGCTGATAACCCGGTGCCCGCAGAGCACTTCCTGCCATTCGGCCACCAATTCCTGCCAGCGGAATTAATCCTCTGACCTGCATGTTCTGAGTGTCATACGGCACGGATCGCACGGAATCCGAAAGCCGAAGAGCCGCCAAAGGGAGAGAGAAAATGAAGAAGTTCGGATTCGCCGCAATCGCCGCAAGCGGGCTGACCGCCGCCATCTTGGGCCTGGCCGCCCCCGCGCAGGCCGCGCCTGCGATGGCCCCGGTGTCCACCGGTGTGGACGCCACCACCATCACCGCGGGTGTTGACCGCCTGGAGTGGCTGGACAAGATCCAGCCGAAGGCCACCGCGCCTCAGGTCGACACCACGGTCCGCCACAGCGGCCGGTGA

Protein Sequence 

>Ms6472_MSMEG6472_protein
MKKFGFAAIAASGLTAAILGLAAPAQAAPAMAPVSTGVDATTITAGVDRLEWLDKIQPKATAPQVDTTVRHSGR

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Unknown in vitro TnSeq [Dragset et al. (2019)]

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