MSMEG6578
ms6578
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 6632857 – 6632961
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG6575 MSMEG6576 MSMEG6577 MSMEG6578 MSMEG6579 MSMEG6580 MSMEG6581 MSMEG6583
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms6578_MSMEG6578_dna
CGTCGATGTTCGAGATCGACGATGTCATCGACCCGGCCGAAACCCGGTCGGTGATCATCTCAACCCTTGTCGCGGCCGCACACCACGAACACGCGAACAGGCCCAGATTCGTCGACACCTGGTAGCCAGAAGCCGTTGACTACACACTGTAGTAGTCATAGCGCTGTTCCATGTGATCCGTCCGGGCCTGGTGCTGTGCCTGCGCACGCCGTCGGGGGCGCGGTACCCGGCGGCTGGGCGTTGTTCTCCAACCAGGGGCCTACATCTTTGCCCTCCCCGACAACTTCACCGACGCCATCGTGCATCTGGTTACCGCCGCGGTGATGTTCGGCGTCGCCGCGGTGCGGATCCGCAGGGACGGCGGGCTGTATGACTCGCTCGGCGAGCTAAGCCTCAAGAGTTGA

Protein Sequence 

>Ms6578_MSMEG6578_protein
VHLVTAAVMFGVAAVRIRRDGGLYDSLGELSLKS

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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