MSMEG6696
ms6696
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 6747083 – 6747487
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG6692 MSMEG6693 MSMEG6694 MSMEG6695 MSMEG6696 MSMEG6697 MSMEG6698 MSMEG6699 MSMEG6700
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms6696_MSMEG6696_dna
CACGGGCGTGAGATCGATGATGACGGTGACGTACTTGTCGCCGCGGCGAGTGTGCCGCCACACGTGCTCATCGACGCCGATCACCGCGACGCCATCGAACCGGGCCGGATCGGCGATGAGCACCCGCTGACCTTCGGCGAGCACGGCGTTGTTGGCAGTGTTCCACGACACCGCAAGCGCCTCGGCGACCCGGGCCACCGACAGGTGTTGGCAGACAAGGGCTTCCAGCGCCCACCGCAGAGCACGCCGGGACAGCCTGGCCCGCGGTTCGGCTGCGGCGCTGGCATCCTGGCGCCACACATGAGCGCAGCCGGCGCAACGGTAACGGCGGATCGTGACCAGCAAAGCCGTGGGTCGCCACCCGAACGGTTCATGAGCCAACGTGCGAGTCACGCTGTCACGTACAACGCCTTCTTCGCCGCAGCGGCGGCACCACCGATCCTCATCGGCGACCCGGCACGCCAGCACGGCCCGATCAGGGTCGAGGCGTTGGCCGGTCACCTCCAACCCGAGCTCGTCGAGGCGGCAGAAAGTCGTCAGGTCAGCGCAGGCGAAGCCCGCCCGACCGGTAGCGTCAGGCACGTCGAGGTCTTTCAGATGGATGGCGTAGGAACCTCCATCATCGGAAGACCTCGACCCCTATCCCGGCACCGACGCGCCGACGACCTCTACACCCTCAACTGCGAAGAGCCTGCAATCGCATGA

Protein Sequence 

>Ms6696_MSMEG6696_protein
MSAAGATVTADRDQQSRGSPPERFMSQRASHAVTYNAFFAAAAAPPILIGDPARQHGPIRVEALAGHLQPELVEAAESRQVSAGEARPTGSVRHVEVFQMDGVGTSIIGRPRPLSRHRRADDLYTLNCEEPAIA

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Growth Advantage in vitro TnSeq [Dragset et al. (2019)]

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