embB
mL0104c
Probable integral membrane indolylacetylinositol arabinosyltransferase EmbB (arabinosylindolylacetylinositol synthase)
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 136573 – 139824
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL0104c_embB_dna
ATGAGTGTGATATACCGCGCACACCGAGTCGCAATCGCAAACCGCACTGCCAGCCGCAATGTGCGGGTGGCGCGTTGGGTTGCTGCCATCGCCGGGCTGATCGGCTTCGTGTCGTCGGTCGTGACACCGCTGCTGCCGGTGGTGCAGACGACCGCGACGCTGAATTGGCCGCAGAACGGCCAATTGAATAGCGTTACGGCGCCCTTGATTTCGTTAACACCGGTCGACATAACCGCCACCGTACCGTGCGCTGTGGTCGCCGCCTTGCCGCCTAGCGGCGGGGTGGTCCTGGGTACCGCGCCCAAGCAGGGGAAAGACGCCAACCTCAACGCGTTGTTCATCGACGTCAACAGTCAGCGGGTGGACGTCACCGACCGCAATGTAGTGATCCTGAGTGTGCCGCGCAATCAGGTGGCCGGGGACGCAGGCGCACCCGGATGTTCCAGCATCGAGGTCACATCGACGCACGCCGGCACCTTCGCCACCTTCGTCGGGGTAACCGATTCAGCCGGAAATCCGCTGCGTGGCGGCTTTCCAGATCCGAACCTACGCCCGCAGATCGTCGGGGTGTTCACCGATCTGACCGGTGGCGCGCCGTCCGGATTGAGGCTCTCGGCGACCATTGACACCCGGTTCTCTAGCACGCCAACGACACTAAAACGGTTTGCTATGATGTTGGCGATCATTACTACCGTCGGCGCCCTGGTCGCACTGTGGCGCCTCGACCAGTTGGATGGCCGGCGAATGCGTCGGCTCATTCCGGCCAGGTGGAGCATGTTCACACTGGTCGACGTCGCGGTGATATTCGGGTTCTTGCTGTGGCATGTGATCGGCGCGAACTCCTCCGATGACGGCTATCAGATGCAGATGGCGCGCACCGCCGACCACTCCGGTTACATGGCGAACTATTTCCGCTGGTTCGGCAGCCCAGAAGACCCCTTCGGGTGGTATTACAACCTGCTAGCGCTTATGATCCATGTCAGCGACGCCAGCATGTGGATCCGCTTGCCCGACTTAATCTGTGGAGTGGCATGCTGGCTACTCTTGTCTCGCGAAGTCCTGCCACGACTAGGTCCCGCGATTGTAGGCTTCAAACCCGCGTTGTGGGCCGCCGGGTTGGTGTTGTTAGCGGCGTGGATGCCCTTCAACAACGGGCTGCGTCCTGAAGGCCAAATCGCCCTGGGCGCGCTAATAACGTATGTGCTCATCGAGCGGGCAATCACCTACGGCCGCATGACACCGGTGGCGCTGGCGACGCTGACTGCGGCGTTCACAATAGGTATCCAGCCTACCGGGCTGATCGCGGTGGCAGCATTGCTGGCTGGCGGCCGGCCGATGCTGTACATTTTGGTGCGCAGGCATCGCGCCGTCGGAGCCTGGCCGCTGGTAGCTCCACTGCTAGCTGCTGGCACCGTTGTTCTCACGGTGGTATTCGCCGAGCAGACGCTGTCAACGGTGTTGGAGGCCACCAAGGTTCGAACCGCAATCGGTCCTGCACAGGCATGGTACACAGAGAACTTGCGCTATTATTACCTCATCCTGCCCACCGTCGACGGTTCACTGTCACGCCGATTCGGCTTCTTGATCACCGCGCTGTGCCTGTTCACTGCGGTGTTAATCACATTGCGGCGCAAACAGATTCCTGGCGTAGCGCGTGGTCCGGCGTGGCGTCTCATCGGCACCATCCTGGGCACCATGTTCTTCTTGACATTCGCCCCAACCAAGTGGGTGCATCACTTCGGACTGTTTGCCGCGTTAGGCGCCGCGGTGGCCGCGTTGACAACTGTGCTGGTGTCACATGAGGTACTGCGGTGGTCTCGTAATCGGATGGCGTTCCTGGCGGCACTGTTATTCGTCATGACGTTGTGCTTCGCAACCACCAACGGCTGGTGGTATGTCTCTAGCTACGGCGTTCCGTTCAACAGTGCCATGCCACGCATTGACGGAATAACTTTCAGCACAATATTTTTCATACTTTTTGCTATTGTCGCGCTCTATGCGTACTATTTGCATTTCACAAACACCGGGCATGGGGAAGGTCGGCTGATCCGGACGTTGACAGTGTCTTTCTGGGCGCCTATCCCGTTCGCAGCCGGGTTAATGACGTTGGTGTTCATAGGATCGATGGTGGCCGGGATCGTGCGACAGTACCCTACCTACTCCAACGGGTGGGCCAATATACGGGCGTTGACCGGCGGCTGCGGCCTGGCCGACGACGTACTCGTCGAGCCGGACAGCAACGCGGGCTACATGACGGCGCTGCCCAGCAACTACGGCCCGCTGGGGCCGCTGGGTGGAGTCAACGCGATCGGCTTCACAGCGAACGGGGTGCCGGAACACACGGTGGCCGAGGCGATTCGAATAACCCCCAATCAGCCTGGCACCGACTACGACTGGGAAGCCCCGACGAAGTTGAAAGCGCCGGGCATCAACGGATCAGTGGTCCCGCTGCCCTACGGCCTTAACCCCAATAAGGTGCCGATTGCAGGCACCTACACCACTGGTGCGCAACAACAGAGCAGACTTACCTCCGCCTGGTACCAACTGCCTAAACCCGACGACAGACATCCTCTGGTGGTGGTAACTGCCGCCGGCAAAATCACCGGTAACAGCGTGTTGCATGGACACACGTATGGGCAGACCGTCGTGCTGGAATACGGCGACCCCGGGCCCAACGGCGGCCTGGTTCCAGCGGGACGATTAGTTCCCGACGATCTGTACGGCGAGCAACCAAAAGCCTGGCGCAACCTGCGCTTCGCACGATCCCAGATGCCCTTCGACGCGGTTGCGGTCCGAGTTGTGGCCGAGAACCTCTCTCTGACACCGGAAGACTGGATCGCGGTGACCCCCCCGCGGGTGCCGGAACTACGCTCACTGCAGGAGTACGTCGGCTCGTCGCAGCCGGTTTTGCTGGACTGGGAGGTAGGGCTGGCGTTCCCGTGTCAGCAGCCGATGCTGCACGCTAACGGCGTCACCGATATTCCGAAATTCCGCATCACACCCGACTACTCAGCTAAAAAAATAGATACCGACACCTGGGAAGACGGCGCCAACGGCGGCCTGTTGGGGATCACCGACCTACTACTGCGGGCCCATGTAATGTCCACGTACCTGGCCCGCGACTGGGGCCGCGACTGGGGCTCACTACGTAAGTTCGACCCCCTTGTGGATACCCATCCCGCGCAACTCGACTTGGACACCGCTACCCGCAGCGGATGGTGGTCACCGGGCAAGATCCGGATTAAACCGTGA

Protein Sequence 

>ML0104c_EmbB_protein
MSVIYRAHRVAIANRTASRNVRVARWVAAIAGLIGFVSSVVTPLLPVVQTTATLNWPQNGQLNSVTAPLISLTPVDITATVPCAVVAALPPSGGVVLGTAPKQGKDANLNALFIDVNSQRVDVTDRNVVILSVPRNQVAGDAGAPGCSSIEVTSTHAGTFATFVGVTDSAGNPLRGGFPDPNLRPQIVGVFTDLTGGAPSGLRLSATIDTRFSSTPTTLKRFAMMLAIITTVGALVALWRLDQLDGRRMRRLIPARWSMFTLVDVAVIFGFLLWHVIGANSSDDGYQMQMARTADHSGYMANYFRWFGSPEDPFGWYYNLLALMIHVSDASMWIRLPDLICGVACWLLLSREVLPRLGPAIVGFKPALWAAGLVLLAAWMPFNNGLRPEGQIALGALITYVLIERAITYGRMTPVALATLTAAFTIGIQPTGLIAVAALLAGGRPMLYILVRRHRAVGAWPLVAPLLAAGTVVLTVVFAEQTLSTVLEATKVRTAIGPAQAWYTENLRYYYLILPTVDGSLSRRFGFLITALCLFTAVLITLRRKQIPGVARGPAWRLIGTILGTMFFLTFAPTKWVHHFGLFAALGAAVAALTTVLVSHEVLRWSRNRMAFLAALLFVMTLCFATTNGWWYVSSYGVPFNSAMPRIDGITFSTIFFILFAIVALYAYYLHFTNTGHGEGRLIRTLTVSFWAPIPFAAGLMTLVFIGSMVAGIVRQYPTYSNGWANIRALTGGCGLADDVLVEPDSNAGYMTALPSNYGPLGPLGGVNAIGFTANGVPEHTVAEAIRITPNQPGTDYDWEAPTKLKAPGINGSVVPLPYGLNPNKVPIAGTYTTGAQQQSRLTSAWYQLPKPDDRHPLVVVTAAGKITGNSVLHGHTYGQTVVLEYGDPGPNGGLVPAGRLVPDDLYGEQPKAWRNLRFARSQMPFDAVAVRVVAENLSLTPEDWIAVTPPRVPELRSLQEYVGSSQPVLLDWEVGLAFPCQQPMLHANGVTDIPKFRITPDYSAKKIDTDTWEDGANGGLLGITDLLLRAHVMSTYLARDWGRDWGSLRKFDPLVDTHPAQLDLDTATRSGWWSPGKIRIKP

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding EmbB with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

3 proteins show strong predicted evidence for PPIs

23 show intermediate predicted evidence for PPIs

160 show weak predicted evidence for PPIs

View all pooled AlphaFold results for EmbB

Use of these data is subject to the AlphaFold Server Output Terms of Use.

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