ML0556c
mL0556c
Aminoglycoside/tetracycline-transport integral membrane protein
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 673151 – 674680
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL0556c_ML0556c_dna
GATGAGCACGCGGGCGGGACGCCGAGTTGCGATCAGCGCCGGCAGCCTCGCAGTACTGCTGGGGGCTCTGGACACCTATGTCGTGGTCACCATCATGCGCGACATCATGCACGACGTTGGCATCCCGGTAAACCAGATGCAGCGGATCACCTGGATCGTCACGATGTATCTGCTGGGCTACATCGCCGCAATGCCGCTGCTGAGCCGAGCTTCCGACCGATTTGGCCGCAAGTTGCTGTTGCAGGTCAGCTTGGCCGGATTCGCCATCGGGTCAGTGATGACCGCACTAGCCGGACAATTTGGCGACTTTCATATGCTGATCGCAGGCCGCACCATCCAGGGGGTCGCCAGCGGCGCGCTGCTACCGATCACCCTTGCACTGGGCGCCGACCTGTGGGCGCAGCGCAACCGCGCTGGCGTGCTCGGTGGCATTGGCGCCGCGCAGGAGCTCGGCAGTGTGCTGGGTCCGCTGTACGGCATCTTCATCGTTTGGCTATTCAGCGATTGGCGATACGTGTTCTGGATCAACATCCCGCTGACCGCGATCGCCATGCTGATGATCCAAGTCAGCCTGTCAGCGCACGACCGCGGTGACGAGCTGGAAAAGGTCGACGTGGTCGGCGGTGTGCTGTTGGCCATCGCGCTGGGCCTGGTGGTCATCGGACTATACAATCCCCAACCCGACAGCAAACAGGTGCTGCCGAGCTATGGGGTGCCCGTACTGGTCGGGGGGATCGTCGCCACGGTGGCATTCGCGGTCTGGGAGCGCTGCGCACGCACCCGGCTGATCGACCCTGCCGGTGTGCACATCCGACCGTTCCTGTCCGCACTGGGCGCATCGGTCGCTGCGGGCGCGGCGCTAATGGTGACACTGGTCAATGTGGAGCTGTTCGGCCAGGGCGTGTTGGGAATGGACCAAACCCAAGCAGCCGGGCTGCTGGTGTGGTTTCTGATCGCGCTGCCGATCGGGGCGGTGTTGGGCGGGTGGGGCGCCACCAAGGCTGGTGACCGCACGATGACCTTCGTCGGGCTGCTCATCACTGCGGGCGGCTATTGGCTGATCTCACATTGGCCAGTCGACTTGTTGAACTACCGGCGCAGCATCTTCGGGCTGTTCAGTGTGCCCACGATGTACGCCGACCTGTTGGTGGCCGGCCTGGGACTTGGCCTGGTGATCGGTCCACTGTCTTCGGCTACCCTGCGAGTTGTCCCGACGGCGCAGCACGGCATCGCCTCAGCGGCAGTGGTGGTCGCCAGGATGACCGGCATGTTGATCGGAGTAGCCGCACTGACCGCCTGGGGGTTGTACCGGTTCAACCAGATCCTTGCGGGGTTGTCTACGGCGGTCCCGCCCGATGCCACCCTGATTGAACGCGCGGCTGCGGTAGCCGACCAGGCCAAACGTGCATACACGATGATGTACAGCGACATATTCATGATCACCGCCATCGTGTGTGTCATCGGAGCACTGCTGGGTCTGCTGATCAGCAGCCGCAAAGAACACGCGAGCGAGCCAAAAGTCCCCGAGTA

Protein Sequence 

>ML0556c_ML0556c_protein
DEHAGGTPSCDQRRQPRSTAGGSGHLCRGHHHARHHARRWHPGKPDAADHLDRHDVSAGLHRRNAAAEPSFRPIWPQVAVAGQLGRIRHRVSDDRTSRTIWRLSYADRRPHHPGGRQRRAATDHPCTGRRPVGAAQPRWRARWHWRRAGARQCAGSAVRHLHRLAIQRLAIRVLDQHPADRDRHADDPSQPVSARPR_RAGKGRRGRRCAVGHRAGPGGHRTIQSPTRQQTGAAELWGARTGRGDRRHGGIRGLGALRTHPADRPCRCAHPTVPVRTGRIGRCGRGANGDTGQCGAVRPGRVGNGPNPSSRAAGVVSDRAADRGGVGRVGRHQGW_PHDDLRRAAHHCGRLLADLTLASRLVELPAQHLRAVQCAHDVRRPVGGRPGTWPGDRSTVFGYPASCPDGAARHRLSGSGGRQDDRHVDRSSRTDRLGVVPVQPDPCGVVYGGPARCHPD_TRGCGSRPGQTCIHDDVQRHIHDHRHRVCHRSTAGSADQQPQRTRERAKSPRV

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding ML0556c with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

0 proteins show strong predicted evidence for PPIs

1 shows intermediate predicted evidence for PPIs

65 show weak predicted evidence for PPIs

View all pooled AlphaFold results for ML0556c

Use of these data is subject to the AlphaFold Server Output Terms of Use.

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