smpB
mL0671
Probable SsrA-binding protein SmpB
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 807507 – 807989
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL0671_smpB_dna
TGGCCAGAAACCCTCGTGGCGGCAAGCAGATTGTGGCCACCAATCGCAAGGCTCGGCACGATTACGCAATCATTGAATTGTTTGAGGCTGGGGTGGCGTTGCTTGGCACCGAGGTGAAAAGTCTGCGGGAGGGGCATGCGTCGCTGGCCGACGCGTTCGCAACCGTCGACAGCGGTGAAGTGTGGTTGCGAAACATGCACATCCCGGAGTATCAGCATGGTAGCTGGACCAATCACGATCCTCGCCGTAACCGCAAGCTGCTGCTGCACCGCCGCCAGATCGACACCCTGGTTGGCAAGATCCGTGACGGCAACCTCGCGCTAGTGCCGTTATCGTTGTATTTTGCCGAGGGCAAGGTCAAGGTCGAGCTTGCGCTGGCGCGCGGCAAGAAACTGCACGACAAGCGCCAGGACATGGCGCGTCGCGATGCTCAGCGCGAAGTAATCCGTGAACTCGGTCGCCGTGCCAAGGGCATGCTCTGAG

Protein Sequence 

>ML0671_SmpB_protein
WPETLVAASRLWPPIARLGTITQSLNCLRLGWRCLAPR_KVCGRGMRRWPTRSQPSTAVKCGCETCTSRSISMVAGPITILAVTASCCCTAARSTPWLARSVTATSR_CRYRCILPRARSRSSLRWRAARNCTTSARTWRVAMLSAK_SVNSVAVPRACSE

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding SmpB with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

0 proteins show strong predicted evidence for PPIs

6 show intermediate predicted evidence for PPIs

65 show weak predicted evidence for PPIs

View all pooled AlphaFold results for SmpB

Use of these data is subject to the AlphaFold Server Output Terms of Use.

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