oppD
mL1122c
PROBABLE OLIGOPEPTIDE-TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER OPPD
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 1301393 – 1303222
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL1122c_oppD_dna
GCGATGAGCCCTCTACTGGAAGTAACTGACCTGGCCGTCACGTTCGAAACAAATGGCGAACCAGTGACCGCGGTGCGCGGCATCAGCTATCGCATCAACGCCGGAGAAGTTGTAGCCATGGTCGGTGAATCGGGTTCGGGTAAGTCCGCGGCGGCGATGGCGGTAGTGGGCTTGCTTCCGGAATACGCTCAGGTGCGCGGTTCGGTTAGGCTACACAACACCGAACTCGTAGGACTCGCCGACAAGACAATGTCGCGGTTTCGCGGCAAAGCGATTGGCACCGTGTTCCAAGATCCGATGTCTGCGCTAACCCCGGTCTACACCGTTGGTGACCAGATCACCGAGGCAATCAAGGTGCACCAGCCGCGAGTGGGAAAGAAAGCTGCCCACCGACGCGCCGTGGAACTGCTTGAGCTAGTTGGAATTACGCAGCCAGATCGTCGCGCTCGCGCCTTTCCGCACGAATTGTCCGGTGGTGAACGGCAACGAGTGGTCATAGCCACCGCTATCGCCAACGACCCCGATTTGCTGATCTGCGACGAGCCCACCACCGCGCTGGACGTCACCGTGCAAGCACAGATCCTAGAAGTGCTCAAGACGGCGCGCGACGTCACTGGCGCCGGTGTGCTCATCATAACCCATGACCTCGGTGTGGTCACCGAGTTCGCCGACCAAGCGCTGGTAATGTACGCCGGCCGAGTCGTCGAGTCAGCCCAAGTAAGTACCCTCTACCGGGAGCGCCAGATGCCCTACACCGTAGGGCTGTTGGGCTCGGTACCTCGGTTGGACGCTACACAGGGAACCCGGCTAGTTCCAATCCCCGGTGCGCCCCCTTCGTTGGCCGGCCTCCAGCAAGAATGCCCATTCGCACCGCGCTGCCCACTGGTAGTCGACGAATGCAGATTGCGCGAACCAGAATTGGTCGAAGTCAGGGCTGGTCACCGCACAGCCTGCATCCGCACCGACCAGGTCAGCGGGCGTAGTGCCGCCGACATCTACGGCATCAACACCGACACTCGCACATCAGCAACCAGCGATTCATCGGTCGTGGTGCGGGTACGGGATCTAGTGAAAACATACCGGCTAACTAAGGGTGTGGGGTTGCGCCGCGCTATCGGCGAAATCCGCGCAGTCAACGGTGTAAGTTTCGAGCTGCAACAGGGTCGCACCCTTGGCATCGTAGGTGAATCCGGATCAGGTAAGTCGACGACTCTGCACGAGATCCTAAGACTCGCTGTACCACAATCAGGATCGATCGAAGTGCTTGGCATCGATGTAGCCACCCTCAACCGGGCAAGCCGACGATCGATGCGACGCAACATCCAAGTTGTGTTCCAAGACCCAGTCGCGTCGCTGGACCCGCGACTACCAGTCTTCGAACTAATCGCCGAGCCTTTGCACGCAAATGGTTTCAGCAAGAATTATACTCAAATGCGTGTCGCTGAGCTGCTCGACATTGTGGGATTGCGCCGCGACGACGCAACTCGTTATCCTACTGAGTTCTCCGGAGGACAGAAGCAGCGCATCGGTATCGCGCGAGCGCTGGCATTGCAGCCCAAAATTCTGGCATTCGACGAACCGGTGTCCGCACTCGACGTATCTATCCAAGCTGGCATCATCAACCTGTTACTTGACCTCCAAGACCGGTTAGGACTGTCGTACCTGTTTGTTTCCCACGACCTTTCGGTGATTAAACATCTCGCACATCAAGTCGCCGTGATGCTCGCCGGTACCATTGTCGAGCAAGGCGACAGCCACGATGTCTTCCGCAATCCGCAGCACGATTACACGCGGCGGCTGCTGGGCGCGATACCACGACCAGAGGTCGGG

Protein Sequence 

>ML1122c_OppD_protein
AMSPLLEVTDLAVTFETNGEPVTAVRGISYRINAGEVVAMVGESGSGKSAAAMAVVGLLPEYAQVRGSVRLHNTELVGLADKTMSRFRGKAIGTVFQDPMSALTPVYTVGDQITEAIKVHQPRVGKKAAHRRAVELLELVGITQPDRRARAFPHELSGGERQRVVIATAIANDPDLLICDEPTTALDVTVQAQILEVLKTARDVTGAGVLIITHDLGVVTEFADQALVMYAGRVVESAQVSTLYRERQMPYTVGLLGSVPRLDATQGTRLVPIPGAPPSLAGLQQECPFAPRCPLVVDECRLREPELVEVRAGHRTACIRTDQVSGRSAADIYGINTDTRTSATSDSSVVVRVRDLVKTYRLTKGVGLRRAIGEIRAVNGVSFELQQGRTLGIVGESGSGKSTTLHEILRLAVPQSGSIEVLGIDVATLNRASRRSMRRNIQVVFQDPVASLDPRLPVFELIAEPLHANGFSKNYTQMRVAELLDIVGLRRDDATRYPTEFSGGQKQRIGIARALALQPKILAFDEPVSALDVSIQAGIINLLLDLQDRLGLSYLFVSHDLSVIKHLAHQVAVMLAGTIVEQGDSHDVFRNPQHDYTRRLLGAIPRPEVG

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding OppD with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

3 proteins show strong predicted evidence for PPIs

12 show intermediate predicted evidence for PPIs

73 show weak predicted evidence for PPIs

View all pooled AlphaFold results for OppD

Use of these data is subject to the AlphaFold Server Output Terms of Use.

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