oppC
mL1123c
PROBABLE OLIGOPEPTIDE-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER OPPC
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 1303219 – 1304118
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL1123c_oppC_dna
TTCGTGACCCTCACCGAGGGCCTATCCATTTCGGAGAAAACAAATTTCGCTTCTCGGAAAACCTTGGTGCTGCGCCGGTTTGCGCACAACCGAACCGCGTCGGTGTCTCTAATGCTGTTAGTACTGCTGTTCGTCGCCTGCTATTTGCTGCCGTCGCTGCTGCCCTATTCCTACGACGATCTTGATTTCAACGCGCTGCTGCAGCCGCCGAACACCCGGCACTGGCTGGGCACTAACGCGCTGGGGCAAGACTTGTTGGCACAGACACTGCGTGGAATGCAGAAATCTATGTTGATCGGTGTCTGTGTGGCGCTTATATCGACCAGCATCGCCGCCACCGTAGGGTCGATCGCGGGTTATTTCGGGCGCTGGCGGGATCGGGTGCTGATGTGGGTGGTCGACCTATTGCTGGTGGTGCCCAGTTTCGTCCTCATCGCCATCATGTCACCCCAAACCAAGAGTTCGGACAACATTATGCTGCTCGTTCTGCTACTGGCCGGCTTTGGCTGGATGGTCAGCTCTCGCATGGTGCGCGGCATGACCATGAGCTTGCGCAAAAGCGAATTCATCCGTGCCGGTAAGTATATGGGCGTCTCCAGCCGTCGTATGATCGTTGGCCACGTGGTACCCAACGTGGCATCAATCTTGATTATCGACGCCACACTCAACGTGGGCTCCGCCATCCTGGCCGAAACTGGTTTGAGCTTTCTCGGTTTCGGCATTAAGCCGCCGGATGTATCTTTAGGGACTTTGATCGCCAACGGCACTCAGTCCGCAACCACGTTCCCTTGGGTGTTCTTGTTTCCAGCCGGCGTGTTGGTGGTAATTCTGGTTTGCGCCAACCTTACCGGCGATGGTTTGCGCGATGCGTTCGACCCGGTCAGCAAGCACCTACGGCGA

Protein Sequence 

>ML1123c_OppC_protein
FVTLTEGLSISEKTNFASRKTLVLRRFAHNRTASVSLMLLVLLFVACYLLPSLLPYSYDDLDFNALLQPPNTRHWLGTNALGQDLLAQTLRGMQKSMLIGVCVALISTSIAATVGSIAGYFGRWRDRVLMWVVDLLLVVPSFVLIAIMSPQTKSSDNIMLLVLLLAGFGWMVSSRMVRGMTMSLRKSEFIRAGKYMGVSSRRMIVGHVVPNVASILIIDATLNVGSAILAETGLSFLGFGIKPPDVSLGTLIANGTQSATTFPWVFLFPAGVLVVILVCANLTGDGLRDAFDPVSKHLRR

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding OppC with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

4 proteins show strong predicted evidence for PPIs

11 show intermediate predicted evidence for PPIs

114 show weak predicted evidence for PPIs

View all pooled AlphaFold results for OppC

Use of these data is subject to the AlphaFold Server Output Terms of Use.

You do not have permission to view notes.