atpD
mL1145
PROBABLE ATP SYNTHASE BETA CHAIN ATPD
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 1336078 – 1337535
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL1145_atpD_dna
TCTACTACTAAGACGACGAAAATGACTGTAAAGACTGGAAGCAAGGGGACCAGCGGTCGCGTGGTACGGGTTACTGGTCCTGTCGTCGACGTCGAATTCCCGCACGGTTTTGTCCCGGAGTTGTTCAACGCGCTAAATGCGAAGACCACCTTCTCCTCGCTTGCCAAGACCCTCACGCTTGAGGTTGCGCAGCATCTCGGCGACAATTTAGTGCGCACCATCTCGTTGCAGCCTACCGACGGGCTGGTGCGCGGAGTTGAGGTAACCGACACTGGTAACTCGATCTCGGTGCCGGTTGGCGAGGGCGTCAAGGGTCATGTCTTCAACGCGCTGGGGTACTGCCTGGATGAGCCCGGGTACGGAGACGAGTTCGAGCACTGGTCGATTCACCGCAAGCCGCCTTCCTTCGAGGAGCTTGAGCCTCGTACTGAGATGCTCGAGACCGGCCTGAAGGTCGTGGATTTGCTGACTCCGTATGTGCGTGGCGGCAAGATCGCCTTGTTTGGCGGTGCTGGTGTGGGCAAGACAGTGCTAATCCAGGAGATGATCAACCGCATCGCCCGTAATTTCGGTGGTACATCGGTGTTCGCCGGAGTTGGGGAGCGTACTCGCGAAGGCAATGACCTGTGGGTCGAGCTTCAGGAAGTCAACGTGCTCAAGGACACCGCCCTGGTGTTCGGCCAGATGGATGAGCCTCCCGGCACCCGTATGCGGGTGGCACTGTCCGCGCTGACGATGGCGGAGTGGTTTCGCGACGAGGCGAGCCAGGATGTTCTGCTGTTCATCGACAACATCTTCCGATTCACCCAGGCTGGATCCGAAGTGTCGACGCTGCTCGGTCGTATGCCGTCGGCGGTAGGGTACCAGCCCACGCTGGCTGACGAGATGGGTGAGCTGCAGGAACGCATCACCTCGACACGAGGCCGGTCGATCACCTCGATGCAGGCCGTCTATGTGCCTGCCGATGACTACACTGACCCGGCGCCGGCAACGACGTTCGCGCACCTGGACGCCACTACTGAGCTGTCGCGTTCGGTGTTTGCCAAGGGCATCTTCCCTGCAGTGGACCCGCTGGCGTCGAGCTCTACCATTCTCGACCCCGGTATTGTTGGTGAAGAGCACTACCGTGTGGCCCAGGAAGTCATCCGGATTTTGCAGCGATACAAAGACCTCCAGGATATCATTGCGATCCTTGGCATCGACGAACTTTCTGAAGAGGACAAGCAATTGGTCAACCGAGCTCGGCGCATCGAGCGGTTTCTCTCTCAGAACATGATGGCGGCTGAACAATTCACTGGGCAGCCGGGTTCGACAGTTCCGGTGAAGGAGACCATCGACGCGTTCGACCGCTTGTGCAAGGGAGAGTTCGACCATGTGCCCGAGCAGGCCTTCTTCTTGATTGGTGGTCTCGACGACTTGACCAAGAAGGCCGAGAGCCTCGGCGCCAAGTTGTGACCC

Protein Sequence 

>ML1145_AtpD_protein
STTKTTKMTVKTGSKGTSGRVVRVTGPVVDVEFPHGFVPELFNALNAKTTFSSLAKTLTLEVAQHLGDNLVRTISLQPTDGLVRGVEVTDTGNSISVPVGEGVKGHVFNALGYCLDEPGYGDEFEHWSIHRKPPSFEELEPRTEMLETGLKVVDLLTPYVRGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEVNVLKDTALVFGQMDEPPGTRMRVALSALTMAEWFRDEASQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSTRGRSITSMQAVYVPADDYTDPAPATTFAHLDATTELSRSVFAKGIFPAVDPLASSSTILDPGIVGEEHYRVAQEVIRILQRYKDLQDIIAILGIDELSEEDKQLVNRARRIERFLSQNMMAAEQFTGQPGSTVPVKETIDAFDRLCKGEFDHVPEQAFFLIGGLDDLTKKAESLGAKL_P

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding AtpD with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

3 proteins show strong predicted evidence for PPIs

3 show intermediate predicted evidence for PPIs

41 show weak predicted evidence for PPIs

View all pooled AlphaFold results for AtpD

Use of these data is subject to the AlphaFold Server Output Terms of Use.

You do not have permission to view notes.