rplT
mL1396
Probable 50S ribosomal protein L20 RplT
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 1676667 – 1677056
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL1396_rplT_dna
CACGCGTAAAGCGGGCAGTCAATGCCCATAAGAAGCGGCGCACTGTCTTGAAGGCTTCGAAAGGCTATCGCGGCCAGCGGTCCCGGCTCTATCGTAAAGCCAAAGAGCAGCAGCTGCATTCGTTGGGCTACGCTTACCGCGACCGTCGCGCGCGTAAGGGGGAGTTCCGCAAATTGTGGATTTCGCGAATCAACGCGGCTGCGCGCGCCAATGACATCACTTACAACCGGTTGATCCAGGGCCTGAAGGCTGCGGATGTCGACGTGGATCGCAAGAATCTCGCCGATATTGCGATCAGCGATCCGGCGGCGTTCACGGCGCTCGTTGAGGTTGCCCGGTCGGGGTTACCCGAAGATGTCAACGTGCCATCCGGAGAAGCTGCTTAACCCA

Protein Sequence 

>ML1396_RplT_protein
HA_SGQSMPIRSGALS_RLRKAIAASGPGSIVKPKSSSCIRWATLTATVARVRGSSANCGFRESTRLRAPMTSLTTG_SRA_RLRMSTWIARISPILRSAIRRRSRRSLRLPGRGYPKMSTCHPEKLLNP

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding RplT with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

2 proteins show strong predicted evidence for PPIs

5 show intermediate predicted evidence for PPIs

59 show weak predicted evidence for PPIs

View all pooled AlphaFold results for RplT

Use of these data is subject to the AlphaFold Server Output Terms of Use.

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