trmD
mL1615c
PROBABLE TRNA (GUANINE-N1)-METHYLTRANSFERASE TRMD (M1G-METHYLTRANSFERASE) (TRNA [GM37] METHYLTRANSFERASE)
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 1938746 – 1939462
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL1615c_trmD_dna
TGGATCTATGAAAATCGATATTGTCACGATTTTCCCGGCTTACCTAGACCCGCTGCGGCAATCGTTGCCGGGCAAGGCGATTGAGTCGGGCCTGGTCGATGTGCAGGTGCACGACCTGCGGCGGTGGACCCATGATGTACACCACTCGGTGGACGACGTGCCCTATGGTGGTGGTCCGGGGATGGTGATGAAAGCGCCGGTATGGGGGGAAGCGTTAGATGAAATCTGTTTCGACGAGACACTGTTGGTGATCCCCACCCCCGCTGGTGCGCTGTTCACCCAGGCCACCGCACAGTGCTGGAGCACCGAGAGACACCTGGTGTTCGCCTGCGGTCGCTACGAGGGCATCGATCAGCGAGTCGTTGATGATGCAGTACGACGAATGCGAGTCGAAGAGGTTTCAATCGGTGACTATGTGTTGCCGGGTGGCGAGTCAGCGGCCGTGGTAATGATCGAGGCTGTTCTGCGCCTGGTGGCTGGGGTGCTCGGCAATCCTGCGTCGCACCGCGATGATTCACACTCGCCGGACCTGGGTCGACTCTTGGAGGGGCCGAGCTATACTCGCCCACCTACCTGGCGTGGTCTCGACGTTCCGCCGGTTTTGTTGTCTGGTGATCATGCTCGAATCGCCGCTTGGCGCCGAGAGGCTTCGCTCCGGAGAACTCGTAAACGCCGTCCCGATTTGTCGGGGGCCCGGTTTGTCTGGGGGCTGGGTTT

Protein Sequence 

>ML1615c_TrmD_protein
WIYENRYCHDFPGLPRPAAAIVAGQGD_VGPGRCAGARPAAVDP_CTPLGGRRALWWWSGDGDESAGMGGSVR_NLFRRDTVGDPHPRWCAVHPGHRTVLEHRETPGVRLRSLRGHRSASR__CSTTNASRRGFNR_LCVAGWRVSGRGNDRGCSAPGGWGARQSCVAPR_FTLAGPGSTLGGAELYSPTYLAWSRRSAGFVVW_SCSNRRLAPRGFAPENS_TPSRFVGGPVCLGAGF

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding TrmD with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

0 proteins show strong predicted evidence for PPIs

0 show intermediate predicted evidence for PPIs

25 show weak predicted evidence for PPIs

View all pooled AlphaFold results for TrmD

Use of these data is subject to the AlphaFold Server Output Terms of Use.

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