rimM
mL1616c
PROBABLE 16S RRNA PROCESSING PROTEIN RIMM
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 1939459 – 1939998
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL1616c_rimM_dna
TAGCTGAGTGCATGCTCATGGTGCTTTGTTGGAGTTGACAATCGGGCGGGTGGTGAAAGCGCACGGTATCGGTGGGGAAGTGGTCGTTGAGATTCGTACCGACGATCCAGCTTCCCGGTTCTGTCCGGGTAATATATTGCGCGCCAAGGATTTTCCACGTGGTGGCCCAGAACGAAGATACACCGTCGTCTATGCGCGTGAGCACGGTGCGCGGCTTCTTGTGCGATTGGCCGGAGTGAGTGACCGTGACGCCGCCGACGCGTTGCGGGGCAGTTTGTTCGTCATCGATTCCCTCGACTTGCCGCCGATCGATGAGCCGGATACTTATTACGACCACCAGCTCGAAGGTCTGCAGGTTCGTACCATGATGGGACGAGACGTTGGTGTCGTTGCTGAGGTGCTTCACACTGCGGCCGGTGAGTTGTTGGCGGTGCGATGTGATTCCGGCGAAGTACTAGTGCCGTTTGTCGGTGCGATTGTCAAGTTGGTGTCTCTAGACGACGGCATAGTCGAAATCGACCCGCCCAAGGGCCTGCTGGA

Protein Sequence 

>ML1616c_RimM_protein
LSACSWCFVGVDNRAGGESARYRWGSGR_DSYRRSSFPVLSG_YIARQGFSTWWPRTKIHRRLCA_ARCAASCAIGRSE_P_RRRRVAGQFVRHRFPRLAADR_AGYLLRPPARRSAGSYHDGTRRWCRC_GASHCGR_VVGGAM_FRRSTSAVCRCDCQVGVSRRRHSRNRPAQGPAG

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding RimM with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

0 proteins show strong predicted evidence for PPIs

3 show intermediate predicted evidence for PPIs

64 show weak predicted evidence for PPIs

View all pooled AlphaFold results for RimM

Use of these data is subject to the AlphaFold Server Output Terms of Use.

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