panB
mL1635
Probable 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 1969135 – 1969995
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL1635_panB_dna
AGCAGAATGTTAATGTTTATGGGGCTGATCCTTCTACATCCTCCATTCAATCAATACAGCGCACCAAAATACGCACCAAGCATCTCCAAAAAATGAAGGCCGAAGGCCACAAGTGGGCCATGCTGACAGCCTATGATTATTCGACTGCTCGGGTTTTCGACGAAGCCGGTATCCCGGTGTTGCTGGTGGGTGATTCAGCGGCCAACGTGGTGTACGGCTACGACACCACGGTGCCGGTTTCGGCCGACGAACTACTCCCGCTGGTTCGCGGCGTGGTGCGGGGTGCGGGGCACGCTCTGGTCGTCGCCGACCTGCCATTCGGCAGCTACGAACCCGGACCCACTGCCGCGCTGGCTGTCGCCACCCGATTTATGAAGGAGGGCGGTGCACACGCCGTAAAACTCGAAGGCGGCCAGCGGGTAGCTGAACAAATCGCGTGCCTGACCGCAGCAGGCATTCCGGTAATGGCGCACATCGGATTCACACCGCAAAGCGTCAACAGCCTCGGCGGTTTCCGGGTACAGGGCCGCGGCGGCGACGCCGAACAAACCGTCGCTGATGCCGTTGCCGTTGCTGAAGCCGGAGCATTTTCCGTCGTAATGGAAATGGTGCCGACCGAGTTAGCCACCCAGATCACCGGCAAATTAACCATTCCGACAATCGGGATCGGTGCGGGTCTTAACTGCGACGCCCAGGTCTTAGTTTGGCAAGATATGGCCGGTTTAAGCAGCGGTAAGGTGGCACGTTTCGTCAAGCAGTATGCTGATATCGCTGGCGAGTTGCGGCGTGCCGCAATGCAGTACGCAGAGGAAGTGGCCAGCGCGGTTTTCCCTGCTGAGGAGCACTGCTTCTGAAAAGCTA

Protein Sequence 

>ML1635_PanB_protein
SRMLMFMGLILLHPPFNQYSAPKYAPSISKK_RPKATSGPC_QPMIIRLLGFSTKPVSRCCWWVIQRPTWCTATTPRCRFRPTNYSRWFAAWCGVRGTLWSSPTCHSAATNPDPLPRWLSPPDL_RRAVHTP_NSKAASG_LNKSRA_PQQAFR_WRTSDSHRKASTASAVSGYRAAAATPNKPSLMPLPLLKPEHFPS_WKWCRPS_PPRSPAN_PFRQSGSVRVLTATPRS_FGKIWPV_AAVRWHVSSSSMLISLASCGVPQCSTQRKWPARFSLLRSTASEKL

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding PanB with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

0 proteins show strong predicted evidence for PPIs

1 shows intermediate predicted evidence for PPIs

6 show weak predicted evidence for PPIs

View all pooled AlphaFold results for PanB

Use of these data is subject to the AlphaFold Server Output Terms of Use.

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