gatB
mL1700c
PROBABLE GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE (SUBUNIT B) GATB (Glu-ADT SUBUNIT B)
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 2050127 – 2051656
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL1700c_gatB_dna
CGAGCTCATGACTGTTGTTTCCGGGGCGTCCAAGGCTTCAGGGGCGGATTTGCTGGATTATGATGTTGTAGTCGCGCGGTTTGATCCGGTGTTCGGGCTTGAGGTGCATGTTGAGCTGTCCACTGTGACTAAAATGTTCTGTGGCTGTGCCACCACATTTGGCGCTGAACCAAACACTCAGGTGTGCCCGGTGTGTCTGGGCCTGCCGGGTTCGCTGCCAGTGCTCAACCGGGCCGCGGTCCAGTCGGCGATTCGGATCGGGCTGGCGTTGAACTGTGAAATCGTGCCCTGGTGCCGCTTCGCACGGAAGAACTACTTCTACCCAGACGTGCCTAAGAATTACCAAATATCGCAATACGATGAGCCGATCGCCATTAACGGCTACCTCGAGGTACCTCTGGAAGACGACACTACCTGGCGGGTGGAGATCGAACGGGCGCACATGGAGGAAGACACCGGCAAGCTGACCCACCTAGGCAGCGAGACCGGCCGCATTTACGGCGCAACGACGTCGCTGATTGACTACAACCGTGCTGGCGTGCCGTTGATCGAAATCGTCACCAAGCCTATTGAGGGGGCCGGAGTTCGGGCACCACAGATCGCTCGGGCGTATGTGAAGGCATTGCAAGATCTGTTGCGCACGTTGGACGTATCCGATGTCCGGATGGACCAAGGCTCAATGCGTTGTGACGCCAACGTATCGTTGAAACCTATCGGTACGGTCGAATTCGGCACCAGGAGCGAGATCAAAAACGTTAATTCATTGAAAAGTGTTGAAATGGCTGTACGCTACGAGATGCAGCGCCAAGGAGCCATTCTGGTGTCCGGAGGTCGAATCGCCCAGGAGACCAGGCACTTTCATGAGGACGGGTACACTAGCCCGGGACGCGCCAAGGAGACAGCGCAGGACTACCGATATTTCCCCGACCCCGACCTAGAGCCCGTCGCGCCCAGCCGCGAGCTGGTCGAGCAATTGCGTCAAACAATACCGGAGTTACCGTGGTTGAGCCGCAAGAGGATTCAGCAGGAATGGGGTATTTCCGACGAGGTGATGCGAGATCTCGTCAACGCTGGCGCGGTTGAATTGGTCGCCGCGACCGTCAAGAACGGCGCCTCCAGCGAACAAGCACGCGCTTGGTGGGGAAACTTCTTGGTGCAGAAAGCTAATGAGGCAAACATCACCTTGGACGAGTTGGCCATCACTCCTGCCCAAGTCGCCGTGGTAGTGGCGTTGGTCGACGAGGGTAAGCTGTCCATTAGGTTGGCTCGCCAGGTCGTCGAGGGTGTGCTTGCCGGGGAGGGTGAACCCGAGCAGGTTATGGTTGATCGCGACTTGGCCTTGGTGCGCGACGACTCGGTGATGCAGGCTGCTGTCGACGAGGCTTTGGCCGCCGATCCTGATGTGGCGGAAAAGATTCGTGGCGGCAAGGTGGCGGCGGCCGGTGCGATCGTAGGAGCGGTGATGAAGACCACCCGCGGGCAGGCCGATGCTGCCCGGGTGCGTGAACTCGTCTTGGCCATTTGCGGGCA

Protein Sequence 

>ML1700c_GatB_protein
RAHDCCFRGVQGFRGGFAGL_CCSRAV_SGVRA_GAC_AVHCD_NVLWLCHHIWR_TKHSGVPGVSGPAGFAASAQPGRGPVGDSDRAGVEL_NRALVPLRTEELLLPRRA_ELPNIAIR_ADRH_RLPRGTSGRRHYLAGGDRTGAHGGRHRQADPPRQRDRPHLRRNDVAD_LQPCWRAVDRNRHQAY_GGRSSGTTDRSGVCEGIARSVAHVGRIRCPDGPRLNAL_RQRIVETYRYGRIRHQERDQKR_FIEKC_NGCTLRDAAPRSHSGVRRSNRPGDQALS_GRVH_PGTRQGDSAGLPIFPRPRPRARRAQPRAGRAIASNNTGVTVVEPQEDSAGMGYFRRGDARSRQRWRG_IGRRDRQERRLQRTSTRLVGKLLGAES__GKHHLGRVGHHSCPSRRGSGVGRRG_AVH_VGSPGRRGCACRGG_TRAGYG_SRLGLGARRLGDAGCCRRGFGRRS_CGGKDSWRQGGGGRCDRRSGDEDHPRAGRCCPGA_TRLGHLRA

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding GatB with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

3 proteins show strong predicted evidence for PPIs

14 show intermediate predicted evidence for PPIs

105 show weak predicted evidence for PPIs

View all pooled AlphaFold results for GatB

Use of these data is subject to the AlphaFold Server Output Terms of Use.

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