gatA
mL1702c
PROBABLE GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE (SUBUNIT A) GATA (Glu-ADT SUBUNIT A)
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 2053124 – 2054617
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL1702c_gatA_dna
ACAACAAATGATTGGTTCACTGCACGAGATCATTCGGTTGGACGCGTCGACGCTGGCTGCCAAGATCGTTGCCAAGGAGCTGTCGTCGGTTGAGATCACCCAGGCCTGCCTGGACCAGATCGAGGCGACGGACGACACCTACCGAGCCTTCCTTCACGTGGCGGCCGAGAAGGCACTGTCGGCGGCGGCCGCCGTCGACAAGGCGGTGGCCGCTGGCGGACAGTTGTCGTCAACGTTGGCCGGAGTTCCATTGGCGCTCAAAGATGTGTTCACCACTGTCGACATGCCGACCACCTGCGGATCCAAGATCCTACAGGGCTGGCATTCCCCTTATGACGCCACTGTCACCACGCGGTTGCGCGCGGCCGGCATCCCGATCCTAGGTAAGACCAACATGGATGAATTCGCGATGGGCAGCTCAACCGAGAATTCCGCTTACGGCCCGACCCGCAACCCGTGGAATGTCGACCGGGTGCCAGGCGGCTCCGGTGGCGGCAGCGCAGCGGCGTTGGCAGCGTTCCAGGCGCCGTTGGCCATCGGCTCCGACACCGGCGGCTCCATCCGGCAGCCGGCCGCGTTGACCGCGACAGTCGGTGTCAAACCCACCTATGGCACAGTTTCCCGGTACGGACTGGTTGCTTGTGCCTCGTCGCTGGATCAGGGAGGGCCGTGCGCGCGCACCGTCTTAGACACTGCACTGCTGCATGCGGTGATCGCCGGCCACGATGCCCGCGACTCCACCTCCGTGGAAGCAGCGGTGCCCGATATCGTAGGTGCTGCTAAGGCCGGCGAGTCGGGTGACCTGCACGGCGTGCGGGTAGGGGTGGTCCGGCAGTTGCGTGGCGAGGGTTATCAGTCGGGGGTGTTGGCGTCATTTCAGGCCGCTGTCGAGCAGTTGATCGCACTGGGTGCAACGGTCAGCGAAGTCGACTGCCCGCACTTTGACTACGCGCTGGCCGCCTACTATCTGATCTTGCCATCGGAGGTGTCAAGCAACCTCGCGCGTTTCGATGCGATGCGCTACGGGCTGCGGGTCGGTGACGACGGCAGCCGCAGCGCCGAAGAGGTGATTGCGCTGACCAGGGCTGCCGGGTTCGGGCCGGAGGTCAAGCGGCGCATCATGATCGGTGCCTACGCATTATCGGCCGGCTATTACGATTCCTACTACAGCCAGGCGCAGAAGGTGCGCACGTTGATTGCGCGTGATTTAGACAAAGCTTACCGATCCGTCGACGTGCTGGTGTCCCCGGCGACGCCGACTACCGCGTTCAGCCTTGGCGAAAAAGCCGACGATCCGCTGGCGATGTACCTGTTCGATCTGTGCACGTTGCCACTCAACCTGGCTGGCCATTGCGGCATGTCGGTGCCGTCCGGGCTGTCCTCGGATGACGATCTGCCGGTGGGCCTGCAGATCATGGCGCCCGCTTTGGCCGACGACCGACTCTACCGGGTGGGTGCCGCCTACGAGGCCGCACGCGGGCCATTGCCGTCCGC

Protein Sequence 

>ML1702c_GatA_protein
TTNDWFTARDHSVGRVDAGCQDRCQGAVVG_DHPGLPGPDRGDGRHLPSLPSRGGREGTVGGGRRRQGGGRWRTVVVNVGRSSIGAQRCVHHCRHADHLRIQDPTGLAFPL_RHCHHAVARGRHPDPR_DQHG_IRDGQLNREFRLRPDPQPVECRPGARRLRWRQRSGVGSVPGAVGHRLRHRRLHPAAGRVDRDSRCQTHLWHSFPVRTGCLCLVAGSGRAVRAHRLRHCTAACGDRRPRCPRLHLRGSSGARYRRCC_GRRVG_PARRAGRGGPAVAWRGLSVGGVGVISGRCRAVDRTGCNGQRSRLPAL_LRAGRLLSDLAIGGVKQPRAFRCDALRAAGR_RRQPQRRRGDCADQGCRVRAGGQAAHHDRCLRIIGRLLRFLLQPGAEGAHVDCA_FRQSLPIRRRAGVPGDADYRVQPWRKSRRSAGDVPVRSVHVATQPGWPLRHVGAVRAVLG_RSAGGPADHGARFGRRPTLPGGCRLRGRTRAIAVR

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding GatA with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

3 proteins show strong predicted evidence for PPIs

17 show intermediate predicted evidence for PPIs

73 show weak predicted evidence for PPIs

View all pooled AlphaFold results for GatA

Use of these data is subject to the AlphaFold Server Output Terms of Use.

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