gatC
mL1703c
PROBABLE GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE (SUBUNIT C) GATC (Glu-ADT SUBUNIT C)
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 2054614 – 2054913
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL1703c_gatC_dna
TTCACGCGTGTCCCCGATCTCCCGCGATGAGGTCTTGCACCTGGCCCGGCTAACCCGACTGGTGTTGACCGATACCGAGTTGGCCAGCTTCTCTAGTCAACTCGACGTCATCCTGGCCCACGTGAGCCAGATTCAGGCTGTTGACGTCACCGGCGTCGAACCTACCGACAATCCGCTCAAATACGTCAACATCACGCGCCCGGACGAGACTGTCCCGTGTCTGACTCAGCAGCAGGCGCTGGCCGAAGCACCCGAAGCCATTTACGGCCGCTTTGTTGTCCCTCAGATCTTGGGGGACAA

Protein Sequence 

>ML1703c_GatC_protein
FTRVPDLPR_GLAPGPANPTGVDRYRVGQLL_STRRHPGPREPDSGC_RHRRRTYRQSAQIRQHHAPGRDCPVSDSAAGAGRSTRSHLRPLCCPSDLGGQ

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding GatC with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

5 proteins show strong predicted evidence for PPIs

16 show intermediate predicted evidence for PPIs

71 show weak predicted evidence for PPIs

View all pooled AlphaFold results for GatC

Use of these data is subject to the AlphaFold Server Output Terms of Use.

You do not have permission to view notes.