uspB
mL1769
PROBABLE SUGAR-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER USPB
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 2144256 – 2145080
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL1769_uspB_dna
CACCTAGTCGCTTGTCCAACGCCGTGACTTACGCCGGCCTGACACTCGGTGCGCTGATCACCGTCGCACCGTTCGCACTCGGCTTACTCACCTCGTTCACGTCGGCGCATCAATTTACGACCGGTACACCGCTGCAATTGCCACGACCACCCACGCTGGCTAACTACGCTGGTTTGTCCGGTGCTGGATTTCTGCGCGCGACCGCGGTTACCGCGTTGATGACGGCGGTAATTCTTCTTGGCCAGCTAACCTTCTCGGTGCTGGCTGGCTACGCGTTCGCACGGTTACGGTTTCCCGGGCGCGATACCCTGTTTTGGGCCTACATTATGACATTGATGGTGCCGGCGACGGTCACGGTGGTGCCGATGTATATGATGATGGCCCAAGTCGGCCTCCGTAACACATTTTGGGCGCTGGTGCTGCCGTTTATGTTTGGCTCCCCATACGCAATTTTCCTGCTGCGCGAACACTTTCGCATCATCCCAAATGATTTGATCAACGCGGCACGTCTCGACGGCGCTAACACTCTGGACGTGATCGTGCATGTTGTGATTCCGTCCAACCGCTCGGTTCTAGCGGCCTTGACACTTATCACAGTAGTCTCGCAGTGGAATAACTTCATGTGGCCGTTGGTGATCACTAGCGGCAACAAGTGGCGTGTGCTTACGGTAGCGACAGCTGACCTACAGTCCCGATTCAACGCTCAGTGGACGCTGGTAATGGCCGCTACCACGGTTGCAATCGTTCCGCTGATCGTACTTTTCGTTGGATTCCAGCGGCACATCATCCCCTCGATCGTCGTCTCGGGGCTGAAATGAGCTGCCT

Protein Sequence 

>ML1769_UspB_protein
HLVACPTP_LTPA_HSVR_SPSHRSHSAYSPRSRRRINLRPVHRCNCHDHPRWLTTLVCPVLDFCARPRLPR__RR_FFLAS_PSRCWLATRSHGYGFPGAIPCFGPTL_H_WCRRRSRWCRCI__WPKSASVTHFGRWCCRLCLAPHTQFSCCANTFASSQMI_STRHVSTALTLWT_SCML_FRPTARF_RP_HLSQ_SRSGITSCGRW_SLAATSGVCLR_RQLTYSPDSTLSGRW_WPLPRLQSFR_SYFSLDSSGTSSPRSSSRG_NELP

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding UspB with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

5 proteins show strong predicted evidence for PPIs

16 show intermediate predicted evidence for PPIs

109 show weak predicted evidence for PPIs

View all pooled AlphaFold results for UspB

Use of these data is subject to the AlphaFold Server Output Terms of Use.

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