rpsJ
mL1864c
30S RIBOSOMAL PROTEIN S10 RPSJ (TRANSCRIPTION ANTITERMINATION FACTOR NUSE)
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 2243607 – 2243912
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL1864c_rpsJ_dna
GAAAAGCGTGGCGGGACAGAAGATCCGCATCAGGCTCAAGGCCTACGACCATGAGGCGATTGACGCCTCGGCTCGCAAAATCGTCGAGACCGTCGTACGCACCGGTGCCAACGTCGTAGGTCCGGTGCCACTGCCGACTGAGAAGAATGTGTACTGCGTCATCCGCTCGCCGCACAAGTACAAGGATTCGCGAGAGCACTTCGAAATGCGCACCCACAAGCGGCTGATAGACATCCTTGATCCAACACCGAAGACGGTTGACGCCCTCATGCGTATCGATCTTCCGGCCAGTGTCGATGTCAACAT

Protein Sequence 

>ML1864c_RpsJ_protein
EKRGGTEDPHQAQGLRP_GD_RLGSQNRRDRRTHRCQRRRSGATAD_EECVLRHPLAAQVQGFARALRNAHPQAADRHP_SNTEDG_RPHAYRSSGQCRCQH

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding RpsJ with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

5 proteins show strong predicted evidence for PPIs

17 show intermediate predicted evidence for PPIs

80 show weak predicted evidence for PPIs

View all pooled AlphaFold results for RpsJ

Use of these data is subject to the AlphaFold Server Output Terms of Use.

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