lpqF
mL1923
PROBABLE CONSERVED LIPOPROTEIN LPQF
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 2305502 – 2306866
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL1923_lpqF_dna
AACCAGCCAGACGAACTAACCAGCGCCCCCCACGGCACCGCACAGTGGCGTTGGCCGCCACCGCCGCTCTGGTCGTTACTATGGCGCCAGGTTGCGCCCATTCCGCTTCCCCGTATGCGAACACCGCGGATCCAGGGCTGCGGATCGACACCAGGACTCCTCCCGGTGTGCGTGCCCAGCAGATCATCGACATGCTTAACTCGGACTGGCCTATCGGCCTGGTCGGAGTTCGCACCTTCGCGTCGCATGACATGGTGGAAATAGTTAAAACCACCTTGGAAGAGCTGTGGTGGGATCGTCCCTTCACCCTCGAAGGTGTAGACATCGGCGCTAGCGTCGCAACGCTGCACCTCATTTCCTCCTACGGCGCACAACAGGACATCCGAATTCACACCGACGGCAATAGCTGGGTTGACCGGTTCGACCTCAATACACAGCCACCGTCGATTACCTCGTGGTACGACATCGATGCCGCGTTAAGCAAAACTGGCGCCCGCTACTCGTATCAGGTTGCCAAGGTCGATAACGGTCGATGCGATCCGGTGCAGGGCACCAATACCGCCGAATCCCTACCTTTGGCATCGATTTTCAAGTTATATGTGCTGCACGCCCTGGCGTATGCGGTCCGCAATGGTACGGTGTCCTGGGATGATCAGCTAACCGTTACCGACAAGAGCAGAGCTGTGGGCTCTTCCGGTTTGGAATTGCCTATTGGAGAACATGTTTCGGTTCGTACTGCCGCCGAGAAAATGATCGCAACTAGCGACAACATGGCCACCGACCTGCTCATTGGGAAGATGGGTACGCATGCCGTCGAGGAAGCGCTCGTCACAGCCGGCCATCACGATCCAGCGAGCATGACTCCGTTCCCCACAATGTACGAGTTATTCTCAGTGGGCTGGGGTCAACCAGATCTACGCAGCCAATGGAAACAGGCATCCCAGCAACTGCGCGCCCAACTGCTGCAGCAGGCGAATTCCACTCCTTACCAACCGGATCCAACCCGCGCTCACACCCCGGCTTCCAATTACGGTGCTGAATGGTACGGAAGCGCCGAAGACATCTGTCGAATCCACGCGGCGCTGCAAGCAGACGCCATCGGCCAAGCCGCACCTGTCAGACAGATCCTATCCGCCGTCGCGGGTATCCAGCTAGATCGCAGCAAATGGCCGTATATCGGGGCGAAAGCCGGCGGCCTACCGGGTGACCTAACCTTTAGCTGGTACGCCGTCGACAAGACACAACAATCTTGGGTAGTCAGCTTTCAGCTGAACTGGCCACGCGACCATGGACCGACCGTGACCAGCTGGATGCTCCAGCTCGCCAAACAGGTGTTCGCACTGTTTGCACCACGATAACATACGC

Protein Sequence 

>ML1923_LpqF_protein
NQPDELTSAPHGTAQWRWPPPPLWSLLWRQVAPIPLPRMRTPRIQGCGSTPGLLPVCVPSRSSTCLTRTGLSAWSEFAPSRRMTWWK_LKPPWKSCGGIVPSPSKV_TSALASQRCTSFPPTAHNRTSEFTPTAIAGLTGSTSIHSHRRLPRGTTSMPR_AKLAPATRIRLPRSITVDAIRCRAPIPPNPYLWHRFSSYMCCTPWRMRSAMVRCPGMIS_PLPTRAELWALPVWNCLLENMFRFVLPPRK_SQLATTWPPTCSLGRWVRMPSRKRSSQPAITIQRA_LRSPQCTSYSQWAGVNQIYAANGNRHPSNCAPNCCSRRIPLLTNRIQPALTPRLPITVLNGTEAPKTSVESTRRCKQTPSAKPHLSDRSYPPSRVSS_IAANGRISGRKPAAYRVT_PLAGTPSTRHNNLG_SAFS_TGHATMDRP_PAGCSSSPNRCSHCLHHDNIR

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding LpqF with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

0 proteins show strong predicted evidence for PPIs

8 show intermediate predicted evidence for PPIs

37 show weak predicted evidence for PPIs

View all pooled AlphaFold results for LpqF

Use of these data is subject to the AlphaFold Server Output Terms of Use.

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