ctpB
mL2000c
PROBABLE CATION-TRANSPORTER P-TYPE ATPASE B CTPB
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 2391324 – 2393576
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL2000c_ctpB_dna
TAAGGTCGTGACAGCTTCGCTTGTGGAGGACACTAATAATAATCATGAGTCCGTGCGACGTATTCAGCTGGATGTTGCAGGCATGCTGTGCGCGGCATGTGCGAGCCGGGTTGAAACGAAGCTGAACAAGATTCCCGGTGTCCGCGCATCAGTCAACTTCGCTACCCGAGTTGCGACCATCGATGCCGTCGACGTGGCGGTTGATGAGCTGCGTCAGGTGATTGAACAGGCTGGATATCGTGCTACTGCGCACGCGGAGTCTGCCGTCGAAGAAATTGATCCTGACGCCGACTATGCCCGCAACCTGCTGCGGCGGCTCATTGTCGCTGCGCTGCTGTTCGTGCCGTTGGCCGATTTGTCGACCATGTTTGCGATTGTGCCGACGAACAGATTCCCCGGCTGGGGATACCTGCTTACCGCGTTAGCAGCCCCGATCGTGACATGGGCTGCGTGGCCTTTCCACCGTGTTGCGTTGCGCAACGCGCGTTATCGGGCAGCATCCATGGAAACGTTGATTTCGGCTGGTATCCTAGCGGCCACCGGTTGGTCTTTGTCGACGATCTTCGTCGACAAAGAGCCACGGCAGACTCATGGAATTTGGCAGGCTATCCTGCACAGCGACTCGATCTACTTTGAGGTTGCTGCGGGAGTCACCGTCTTTGTTCTTGCGGGTCGGTTCTTTGAGGCTCGCGCCAAGTCCAAGGCTGGTAGTGCATTACGAGCGCTCGCTGCTCGGGGTGCCAAAAATGTGGAGGTCTTGTTGCCCAATGGAGCAGAACTTACTATACCGGCTGGAGAGCTCAAAAAGCAACAGCACTTTCTGGTAAGGCCCGGTGAGACCATTACTGCCGACGGTGTGGTCATCGATGGCACTGCGACGATCGATATGAGCGCTATCACTGGCGAGGCCAGACCAGTACACGCGTCGCCGGCAAGCACCGTGGTGGGCGGCACCACAGTGCTTGACGGCCGCTTAGTGATCGAGGCTACCGCAGTCGGTGGCGATACTCAATTTGCGGCGATGGTCCGTCTCGTCGAGGACGCACAGGTACAGAAGGCCCGTGTGCAGCACCTCGCCGATCGCATCGCGGCCGTGTTCGTGCCGATGGTCTTTGTCATCGCAGGATTGGCGGGTGCCTCTTGGCTGTTGGCTGGAGCCAGCCCAGATCGCGCTTTCTCTGTGGTGCTCGGGGTCTTGGTGATTGCATGTCCATGTACGCTCGGGCTTGCTACCCCCACCGCTATGATGGTTGCCTCCGGCAGAGGCGCTCAATTGGGGATTTTCATCAAGGGTTACCGAGCGCTGGAAACTATCAACGCGATTGACACCGTGGTCTTCGACAAGACCGGCACGTTGACACTTGGGCAGCTGAGCGTTAGCACGGTAACGTCAACCGGCGGGTGGTGTTCTGGGGAAGTTCTGGCGCTCGCCTCCGCAGTCGAAGCGGCCTCTGAACATTCGGTGGCAACGGCTATTGTGGCCGCTTATGCAGATCCACGTCCGGTTGCCGACTTCGTCGCGTTTGCCGGATGCGGTGTATCGGGAGTTGTTGCTGAGCACCATGTCAAAATTGGCAAGCCGTCCTGGGTAACCCGGAATGCGCCATGCGACGTCGTTCTCGAATCCGCACGGAGAGAAGGCGAATCACGGGGAGAGACAGTAGTTTTCGTATCGGTAGATGGTGTTGCATGTGGAGCTGTCGCGATCGCCGACACCGTCAAGGATTCAGCAGCCGACGCCATCTCAGCACTGTGCAGCCGCGGGTTGCACACAATTTTGCTCACCGGTGATAATCAGGCCGCCGCGCGTGCGGTTGCAGCACAGGTAGGAATCGACACCGTTATCGCCGATATGCTGCCCGAAGCTAAGGTCGACGTTATTCAACGACTGCGTGATCAGGGGCACACCGTCGCGATGGTCGGAGACGGCATCAACGACGGCCCCGCTTTGGCATGTGCCGATTTAGGCTTGGCGATGGGGCGCGGTACTGATGTCGCGATCGGCGCCGCCGATCTCATTCTGGTCCGCGACAGCCTGGGTGTTGTTCCGGTGGCATTGGATCTGGCACGTGCTACCATGCGGACAATTCGGATTAATATGATCTGGGCGTTCGGCTACAACGTTGCGGCAATCCCCATCGCCTCCAGTGGTCTGCTCAATCCTTTGATCGCCGGTGCTGCCATGGCGTTTTCGTCGTTTTTCGTGGTGTCAAACAGCTTGCGGCTAAGTAATTTTGGTCTTTCCCAAACGTC

Protein Sequence 

>ML2000c_CtpB_protein
GRDSFACGGH___S_VRATYSAGCCRHAVRGMCEPG_NEAEQDSRCPRISQLRYPSCDHRCRRRGG__AASGD_TGWISCYCARGVCRRRN_S_RRLCPQPAAAAHCRCAAVRAVGRFVDHVCDCADEQIPRLGIPAYRVSSPDRDMGCVAFPPCCVAQRALSGSIHGNVDFGWYPSGHRLVFVDDLRRQRATADSWNLAGYPAQRLDLL_GCCGSHRLCSCGSVL_GSRQVQGW_CITSARCSGCQKCGGLVAQWSRTYYTGWRAQKATALSGKAR_DHYCRRCGHRWHCDDRYERYHWRGQTSTRVAGKHRGGRHHSA_RPLSDRGYRSRWRYSICGDGPSRRGRTGTEGPCAAPRRSHRGRVRADGLCHRRIGGCLLAVGWSQPRSRFLCGARGLGDCMSMYARACYPHRYDGCLRQRRSIGDFHQGLPSAGNYQRD_HRGLRQDRHVDTWAAER_HGNVNRRVVFWGSSGARLRSRSGL_TFGGNGYCGRLCRSTSGCRLRRVCRMRCIGSCC_APCQNWQAVLGNPECAMRRRSRIRTERRRITGRDSSFRIGRWCCMWSCRDRRHRQGFSSRRHLSTVQPRVAHNFAHR__SGRRACGCSTGRNRHRYRRYAARS_GRRYSTTA_SGAHRRDGRRRHQRRPRFGMCRFRLGDGARY_CRDRRRRSHSGPRQPGCCSGGIGSGTCYHADNSD_YDLGVRLQRCGNPHRLQWSAQSFDRRCCHGVFVVFRGVKQLAAK_FWSFPNV

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding CtpB with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

0 proteins show strong predicted evidence for PPIs

1 shows intermediate predicted evidence for PPIs

45 show weak predicted evidence for PPIs

View all pooled AlphaFold results for CtpB

Use of these data is subject to the AlphaFold Server Output Terms of Use.

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