cspB
mL2147c
PROBABLE COLD SHOCK-LIKE PROTEIN B CSPB
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 2552018 – 2552428
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL2147c_cspB_dna
GAGACCAGTGCCGACCGGCAAGGTGAAGTGGTATGACGCCGACAAGGGGTTTGGCTTCCTTTCACAGGAGGATGGCGAAGACGTCTATGTTCGCTCGTCGGCGTTGCCCGCGGGTGTCGAGGGGCTCAAAGCCGGGCAACGGGTAGAGTTTGGCGTGGCTTCTGGCCGGCGTGGGCCGCAAGCATTGAGCCTCAAGTTGATTGATCCGCCACCGAGCTTTGCTCGCCAAGTGCGCCGCGAGGCGCTGGCCGAGCACAGGCACAGCCCGGATGAACTGCACGGCATGGTCGAAGATATGATCACTTTGCTGGAGAGCACGGTGCAGCCCGAATTGCGTAAAGGCCGCTACCCGGATCGCAAAACGGCCAGGAGGGTATCTGAGGTGGTCAAGGCGGTGGCCCGCGAGTTCGA

Protein Sequence 

>ML2147c_CspB_protein
ETSADRQGEVV_RRQGVWLPFTGGWRRRLCSLVGVARGCRGAQSRATGRVWRGFWPAWAASIEPQVD_SATELCSPSAPRGAGRAQAQPG_TARHGRRYDHFAGEHGAARIA_RPLPGSQNGQEGI_GGQGGGPRVR

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding CspB with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

0 proteins show strong predicted evidence for PPIs

0 show intermediate predicted evidence for PPIs

11 show weak predicted evidence for PPIs

View all pooled AlphaFold results for CspB

Use of these data is subject to the AlphaFold Server Output Terms of Use.

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