cpsY
mL2209
POSSIBLE UDP-GLUCOSE-4-EPIMERASE CPSY (GALACTOWALDENASE) (UDP-GALACTOSE-4-EPIMERASE) (URIDINE DIPHOSPHATE GALACTOSE-4-EPIMERASE) (URIDINE DIPHOSPHO-GALACTOSE-4-EPIMERASE)
M. leprae · TN
[TnSeq DB] [SeqHub]
TN Coordinates: 2624331 – 2625959
Vulnerability Index (VI):
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>mL2209_cpsY_dna
AGATTGTTTCATGCGAAGACGATCGGCCCGTGCGGCGCACCCTTGAACCCATCATTGTTACCCGGCAGGGAAAGGTTGCCCGGCTCGAGTCCAGTTTGACCCCGCACGAAGCACAGATCGAAGATTTGATCTTTCTGCGAAAGGCGTTGAACCGGGCTGATATTCCTTTCCTATTTATCCGCAACCACAAAAACCGGCCCGTTCTTGCCATCAACATCAAACTGCGCCCCGCGGTCGAACGCGCGCTCGTCACCGCGTGTGCCAGCGAACCTATGTACGCCAAAACAATAGACGAACGCGGGCTTTCTCCCGTGCTAGTGGCCAAAGGTCAATTATCGCAGTCGATCGATCCACGCATCGTGCGGTTGTATCGACGAAGGATTGCACCGGGAGGATTTCGGTTCGGTTCGAGGTTCGGTGTCGAACTGCAGTTCTGGTCCTTCGAGGAGACCCTGATCCGCTGCCCGGTGGAAAACTCCCTGACCCGCAAAGTGCTACCACGCAAAGAAGTAACACCGGCTACCATCAAGCTCTACGGGTACAAATGGCATACCATTGAGGGGATGTTCACCCCGCACGCGAGTGACGTCACGTTTGACATCGATCTGGTGTTCTCGTGGGTCGACGGTAGTGATCCAGAATTTCGAGCACGTCGGGCAGCCGAAATGTCGCACCACGTAGTAGGTGAAGGCGACGACGCCGACGCGCGGATCCGACAGATCGACGAGTTGAAATACGCCTTGCGGTCGGTGAACATGTTTGCTCCATGGATCCGGCGCATCTTCATCGCGACAGATTCGATCCCGCCGTCATGGTTAGCCGATCACCCAATGATCACAATTGTCCCCGCGGAGGACCATTTTTCAGATAGGTCGGCATTGCCAACCTACAACTCACACGCGGTGGAAAGCCAGCTACACCGGATACCCGACCTCAGCGAGCATTTCCTGTACTCCAATGACGACATGTTTTTCGGTCGCCCACTCAAAGCAAGCATGTTCTTCTCCCCGGGCGGAGTGACCAGGTTCATCGAAGCCAAGACCCGTATAGGATTAGGCACTAACGATCCAACGCGCAGTGGCTTCGAGAATGCGGCCCGGGTTAACCGCCAACTCCTCTTACGGCGATTTGGACAACTGATTACGCGTCATCTAGAACACACCACGGTTCCGCTACGCAAGAGCGTGCTGTTCGAGATGGAACAAGAATTCCCGGAAGAATTCGCTCGGACCCAGGAAAGTGTGTTCCGGTCCGGAACAGATATATCTGTTACCAATTCGCTCTACCATTACTACGCGCTGATAACTGGACGCGCTGTCCAACAAGAAAAAGCCAAAGTTCTGTACGTGGACACCACTTCGTACACAGGCCTCAACTTACTTCCCGAACTGCGGAAACGTCGCAACTACGACTTTTTCTGCCTCAACGACGGTAGTTTCCCCGAAGTCCCCGCAACGGAGCGTGCCGAACGGGTCGTCAGTTTTCTGGAACGCTACTTTCCAATACCGGCACCCTGGGAAAAGGTCGCCACGGACTTCAATCGCCAAGACTTTGCGTCACCGACGGTGTCAGCACCATTGGAGGATGGGCAAACAGCGAATCCCGCCCAGACGGCTCGATAAACAGCCC

Protein Sequence 

>ML2209_CpsY_protein
RLFHAKTIGPCGAPLNPSLLPGRERLPGSSPV_PRTKHRSKI_SFCERR_TGLIFLSYLSATTKTGPFLPSTSNCAPRSNARSSPRVPANLCTPKQ_TNAGFLPC_WPKVNYRSRSIHASCGCIDEGLHREDFGSVRGSVSNCSSGPSRRP_SAARWKTP_PAKCYHAKK_HRLPSSSTGTNGIPLRGCSPRTRVTSRLTSIWCSRGSTVVIQNFEHVGQPKCRTT__VKATTPTRGSDRSTS_NTPCGR_TCLLHGSGASSSRQIRSRRHG_PITQ_SQLSPRRTIFQIGRHCQPTTHTRWKASYTGYPTSASISCTPMTTCFSVAHSKQACSSPRAE_PGSSKPRPV_D_ALTIQRAVASRMRPGLTANSSYGDLDN_LRVI_NTPRFRYARACCSRWNKNSRKNSLGPRKVCSGPEQIYLLPIRSTITTR__LDALSNKKKPKFCTWTPLRTQASTYFPNCGNVATTTFSASTTVVSPKSPQRSVPNGSSVFWNATFQYRHPGKRSPRTSIAKTLRHRRCQHHWRMGKQRIPPRRLDKQP

No essentiality data available for this gene.

AlphaFold Protein Interactions

Protein–protein interactions (PPIs) were predicted by co-folding CpsY with every other protein in the M. leprae proteome using a pooled-AlphaFold3 based approach (Horia et al.). The size-corrected interface predicted template modeling (sciPTM) score indicates confidence in the predicted interaction: weak evidence (sciPTM > 0.05), intermediate evidence (sciPTM > 0.2), or strong evidence (sciPTM > 0.4).

0 proteins show strong predicted evidence for PPIs

2 show intermediate predicted evidence for PPIs

16 show weak predicted evidence for PPIs

View all pooled AlphaFold results for CpsY

Use of these data is subject to the AlphaFold Server Output Terms of Use.

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