MSMEG0072
ms0072
-
M. smegmatis · MC2-155
[TnSeq DB] [SeqHub]
MC2-155 Coordinates: 95440 – 96300
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
 +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 (4) PMID: 38418874 MSMEG0070 MSMEG0071 MSMEG0072 MSMEG0073 MSMEG0074 MSMEG0075
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms0072_MSMEG0072_dna
CAGCACCGCCTGGTTGGCCGCCAACCGCTCGGCAGCGGAGGCCTTGAGCGCTGCGAGCTCGGCCTCATCATGGGCCGAGCCCACATGCTCGATGTTGCGTGACCCGCGTCGGGTGGACCACACGATCTGCACCGCAGTGGCCCCCGAAGCGGTCTTCACTGTGCGCACGTACGCCACCAGGGCAGCCTACGGCCCGACCTTAGTGCGCAAATTCCGGCCGAGCCGACTCCGAAACTGCAGGTCAAGAACCCGCCACTACCCCAAACCGGAAACCGTGAGCCAAGTCAGGTCCCGCTGACCGTGGAGGCCTTCGAGGGCAACCGCGCCGAGACCGCCACCATGCTGCCGGTGATCAACGCGTTCAAGGCCGCCCATCAACTCACCGATGTCACCGTGGTCGCCGATGCGGGCATGATCTCCGAGGCCAACCAGGTCGCGCTGCAGTCCGCCGGCCTGTCCTACATCCTCGGCGCCAAGATTCCGTTCCTGCCCGATGTGGTGCGCGAATGGCGGGACAAACACCCCGACGAGGCGATCCCCGATGGCCTGGTGCTCACCCAACCGTGGCCGGCCACCAGCAGCGAGAAGGCCCGCGGCATCCCGGACCGGGTCATCCACTACCAATTCCGCCACGACCGCGCCCGGCGCACCCTGCGCGGCATCGACGAGCAAGTGGCCAAGGCCCAGCGCGCAGTCGACGGGCACGCCCCGGTCAAGCGCAACCGCTACATCCAACTCACTGGCGCCACCAAGTCGGTGAACCGCACGCTGGAGGCCAAGACCCGCGCCCTGGCCGGCTGGAAGGGCTACACCACCAACCTCGTCGGGCAGCCCGCGTCGTTTGTCATCGATGCCTATCACCAGCTCTGGCACATCGAGAAGGCCTTCCGGATGTCCAAGCACGACCTGCAGGCCCGCCCGATCTACCACCATTTACGCGAATCGATCGAAGCCCACCTGAGCATCGTGGTCGCCGCAATGGCCGTCAGCCACTTCATCGAGACCCAAACCGGCTGGAGCATCAAGAAATTCGTCCGAACCGCACGCCGCTACCGCACCGTGAAGATCAAGGCCGGCACCCAGACCCTCACCGCCGCCGACCCGCTACCCGAGGACCTACGAGCAGTCCTCATCAAGATCCGCGCCGACGGTGCACACTAA

Protein Sequence 

>Ms0072_MSMEG0072_protein
VEAFEGNRAETATMLPVINAFKAAHQLTDVTVVADAGMISEANQVALQSAGLSYILGAKIPFLPDVVREWRDKHPDEAIPDGLVLTQPWPATSSEKARGIPDRVIHYQFRHDRARRTLRGIDEQVAKAQRAVDGHAPVKRNRYIQLTGATKSVNRTLEAKTRALAGWKGYTTNLVGQPASFVIDAYHQLWHIEKAFRMSKHDLQARPIYHHLRESIEAHLSIVVAAMAVSHFIETQTGWSIKKFVRTARRYRTVKIKAGTQTLTAADPLPEDLRAVLIKIRADGAH

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Unknown in vitro TnSeq [Dragset et al. (2019)]

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