MSMEG0073
ms0073
-
M. smegmatis · MC2-155
[TnSeq DB] [SeqHub]
MC2-155 Coordinates: 97891 – 99105
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
 +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon TSS Legend ? Ju, 2024 (4) Li, 2017 (5) (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 (4) PMID: 38418874 (5) PMID: 29326668 MSMEG0071 MSMEG0072 MSMEG0073 MSMEG0074 MSMEG0075 MSMEG0076 MSMEG0077
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms0073_MSMEG0073_dna
GGATCGACTTGCCAACGGCTTCCACACGTTGTCCCACAATAACTTCCGGCGGTCCTCGGGCGGATTCGCATCGGCCGGCGCCGGTGGCAGAATTTTCACCAGATCGGTATCGCTGACCCTCGCCAACTGCGCGCTGACATCGGGAGCGATCACCTGCAGGCGGTCACGACCAGCCATTTTTCCGCCCTCCTGACTTGGCTCACGGTTTCCGGTTTGGGGTAGTGGCGGGTTCTTGACCTGCAGTTTCGGAGTCGGCTCGGCCGGAATTTGCGCACTAAGGTCGGGCCGTAGGCTGCCCTGGTGGCGTACGTGCGCACAGTGAAGACCGCTTCGGGGGCCACTGCGGTGCAGATCGTGTGGTCCACCCGACGCGGGTCACGCAACATCGAGCATGTGGGCTCGGCCCATGATGAGGCCGAGCTCGCAGCGCTCAAGGCCTCCGCTGCCGAGCGGTTGGCGGCCAACCAGGCGGTGCTGGATCTGGAGGTGTCCCCGCCGGCCGGTTCGGAGCCGTTGCCGATCACCTCCTCACAGATGACCCATCTGTGGGACGGGCTCTGTTCGGCGTATCGGATCCTCGGGTTCGACTCAGCCGCCGAGGGCGACAATGTGTTTCGGGATCTGGTGCTGGCCAGGATCATCGAACCCAGCAGCAAGGCCGACGCCGGACGGGTGCTCACCGAGGTCGGTGTCGAACCGGCCTCCTATGCCACGGTCAAACGCCGGCTGCCGATCTACGCCCAGCCGCAGTGGCGGCAGTCCTTGGCCGCGGCCAGTGCACGTCGCGCCGGGTTGGGGCCCGCATCGCTGGTGCTATTCGATGTGAGCACCTTGTATTTCGAGACCGACGCCGGCGACGGCTTCCGCGAGCCCGGATTCTCCAAGGAACGCCGACTCGAGCCGCAGATCACCCTGGGGTTGCTTACCGATGCCGCCGGGTTCCCGCTGACCGTGGAGGCCTTCGAGGGCAACCGCGCCGAGACCGCCACCATGCTGCCGGTGATCAACGCGTTCAAGGCCGCCCATCAACTCACCGATGTCACCGTGGTCGCCGATGCGGGCATGATCTCCGAGGCCAACCAGGTCGCGCTGCAGTCCGCCGGCCTGTCCTACATCCTCGGCGCCAAGATTCCGTTCCTGCCCGATGTGGTGCGCGAATGGCGGGACAAACACCCCGACGAGGCGATCCCCGATGGCCTGGTGCTCACCCAACCGTGGCCGGCCACCAGCAGCGAGAAGGCCCGCGGCATCCCGGACCGGGTCATCCACTACCAATTCCGCCACGACCGCGCCCGGCGCACCCTGCGCGGCATCGACGAGCAAGTGGCCAAGGCCCAGCGCGCAGTCGACGGGCACGCCCCGGTCAAGCGCAACCGCTACATCCAACTCACTGGCGCCACCAAGTCGGTGAACCGCACGCTGGAGGCCAAGACCCGCGCCCTGGCCGGCTGGAACCCGACTTGGCTCAAATTAGTGTGCACCGTCGGCGCGGATCTTGATGAGGACTGCTCGTAG

Protein Sequence 

>Ms0073_MSMEG0073_protein
VAYVRTVKTASGATAVQIVWSTRRGSRNIEHVGSAHDEAELAALKASAAERLAANQAVLDLEVSPPAGSEPLPITSSQMTHLWDGLCSAYRILGFDSAAEGDNVFRDLVLARIIEPSSKADAGRVLTEVGVEPASYATVKRRLPIYAQPQWRQSLAAASARRAGLGPASLVLFDVSTLYFETDAGDGFREPGFSKERRLEPQITLGLLTDAAGFPLTVEAFEGNRAETATMLPVINAFKAAHQLTDVTVVADAGMISEANQVALQSAGLSYILGAKIPFLPDVVREWRDKHPDEAIPDGLVLTQPWPATSSEKARGIPDRVIHYQFRHDRARRTLRGIDEQVAKAQRAVDGHAPVKRNRYIQLTGATKSVNRTLEAKTRALAGWNPTWLKLVCTVGADLDEDCS

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Unknown in vitro TnSeq [Dragset et al. (2019)]

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